HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 3s4p

System information

Experimental technique X-ray
Experimental resolution 2.56
System mass 15.01 kDa
Deposition year 2011
Molecule type RNA
# RNA entities 1
Organism N/A
RCSB PDB Entry 3s4p
Reference Szychowski Janek, Kondo Jiro, Zahr Omar, Auclair Karine, Westhof Eric, Hanessian Stephen, Keillor Jeffrey W.. . Inhibition of Aminoglycoside‐Deactivating Enzymes APH(3′)‐IIIa and AAC(6′)‐Ii by Amphiphilic Paromomycin O2′′‐Ether Analogues ChemMedChem

Compound JS6
Residue . / 50
Chain C / A
Non-redundant True
Interacting RNA chains A/A, B/B
Volume 105.99 Å3
Hydrophobicity 0.127
Hydrophilicity 0.944
Buriedness 0.592
Don/acc character 2.570
SiteScore 0.672
D Score 0.634

Compound JS6
Residue . / 51
Chain D / B
Non-redundant True
Interacting RNA chains A/A, B/B
Volume 393.42 Å3
Hydrophobicity 0.110
Hydrophilicity 0.998
Buriedness 0.626
Don/acc character 1.784
SiteScore 0.887
D Score 0.896