HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 3s4p

System information

Experimental technique X-ray
Experimental resolution 2.56
System mass 15.01 kDa
Deposition year 2011
Molecule type RNA
# RNA entities 1
Organism N/A
RCSB PDB Entry 3s4p
Reference Szychowski Janek, Kondo Jiro, Zahr Omar, Auclair Karine, Westhof Eric, Hanessian Stephen, Keillor Jeffrey W.. . Inhibition of Aminoglycoside‐Deactivating Enzymes APH(3′)‐IIIa and AAC(6′)‐Ii by Amphiphilic Paromomycin O2′′‐Ether Analogues ChemMedChem

Compound JS6
Residue . / 50
Chain C / A
Non-redundant True
Interacting RNA chains B/B, A/A
Volume 97.07 Å3
Hydrophobicity 0.270
Hydrophilicity 0.852
Buriedness 0.574
Don/acc character 0.779
SiteScore 0.712
D Score 0.697

Compound JS6
Residue . / 51
Chain D / B
Non-redundant True
Interacting RNA chains B/B, A/A
Volume 366.32 Å3
Hydrophobicity 0.223
Hydrophilicity 0.902
Buriedness 0.620
Don/acc character 1.096
SiteScore 0.906
D Score 0.929