HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Compound PQ0

Identifiers

  • Canonical SMILES:
    NC1=Nc2[nH]cc(C#N)c2C(=O)N1
  • IUPAC name:
    2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile
  • InChi:
    InChI=1S/C7H5N5O/c8-1-3-2-10-5-4(3)6(13)12-7(9)11-5/h2H,(H4,9,10,11,12,13)
  • InChiKey:
    FMKSMYDYKXQYRV-UHFFFAOYSA-N

Chemistry rules

Lipinski's RO5 Veber Pfizer's 3/75

External links

RNA-SM complexes

PDB code Deposition date Reference publication
3gca Feb. 21, 2009 Spitale Robert C., Torelli Andrew T., Krucinska Jolanta, Bandarian Vahe, Wedekind Joseph E.. . The Structural Basis for Recognition of the PreQ0 Metabolite by an Unusually Small Riboswitch Aptamer Domain Journal of Biological Chemistry

Physicochemical filters

Descriptor Lipinski's RO5 Veber Pfizer's 3/75
Compliance
MW 175.05 g/mol
HBA 4
HBD 3
HBA + HBD
AlogP -0.29
TPSA 111.35
RB 0

Radar chart