Complex 3rkf
System information
Experimental technique | X-ray |
Experimental resolution | 2.50 |
System mass | 90.95 kDa |
Deposition year | 2011 |
Molecule type | RNA |
# RNA entities | 1 |
Organism | Bacillus |
RCSB PDB Entry | 3rkf |
Reference | Buck Janina, Wacker Anna, Warkentin Eberhart, Wöhnert Jens, Wirmer-Bartoschek Julia, Schwalbe Harald. . Influence of ground-state structure and Mg 2+ binding on folding kinetics of the guanine-sensing riboswitch aptamer domain Nucleic Acids Research |
Compound | DX4 |
Residue | . / 91 |
Chain | E / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 139.94 Å3 |
Hydrophobicity | 0.105 |
Hydrophilicity | 1.780 |
Buriedness | 0.823 |
Don/acc character | 0.434 |
SiteScore | 0.923 |
D Score | 0.647 |
Compound | DX4 |
Residue | . / 91 |
Chain | O / B |
Non-redundant | False |
Interacting RNA chains | B/B |
Volume | 178.02 Å3 |
Hydrophobicity | 0.056 |
Hydrophilicity | 1.410 |
Buriedness | 0.763 |
Don/acc character | 0.954 |
SiteScore | 0.901 |
D Score | 0.756 |
Compound | DX4 |
Residue | . / 91 |
Chain | U / C |
Non-redundant | True |
Interacting RNA chains | C/C |
Volume | 160.87 Å3 |
Hydrophobicity | 0.000 |
Hydrophilicity | 1.653 |
Buriedness | 0.795 |
Don/acc character | 0.588 |
SiteScore | 0.950 |
D Score | 0.730 |
Compound | DX4 |
Residue | . / 91 |
Chain | AA / D |
Non-redundant | False |
Interacting RNA chains | D/D |
Volume | 191.39 Å3 |
Hydrophobicity | 0.339 |
Hydrophilicity | 1.433 |
Buriedness | 0.812 |
Don/acc character | 0.769 |
SiteScore | 0.930 |
D Score | 0.772 |