HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 3gca

System information

Experimental technique X-ray
Experimental resolution 2.75
System mass 10.97 kDa
Deposition year 2009
Molecule type RNA
# RNA entities 1
Organism N/A
RCSB PDB Entry 3gca
Reference Spitale Robert C., Torelli Andrew T., Krucinska Jolanta, Bandarian Vahe, Wedekind Joseph E.. . The Structural Basis for Recognition of the PreQ0 Metabolite by an Unusually Small Riboswitch Aptamer Domain Journal of Biological Chemistry
Equivalence Class NR_all_80276.6
BGSU version: 4.48

Compound PQ0
Residue . / 34
Chain B / A
Non-redundant True
Interacting RNA chains A/A
RNA environment detailled ion
RNA environment global RNA
RNA family chains A/A: riboswitch
RNA family global riboswitch
Volume 142.69 Å3
Hydrophobicity 0.483
Hydrophilicity 1.000
Buriedness 0.652
Don/acc character 2.331
SiteScore 0.864
D Score 0.667
Kd