HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 3npq

System information

Experimental technique X-ray
Experimental resolution 2.18
System mass 56.04 kDa
Deposition year 2010
Molecule type RNA
# RNA entities 1
Organism Ralstonia
RCSB PDB Entry 3npq
Reference Edwards Andrea L., Reyes Francis E., Héroux Annie, Batey Robert T.. . Structural basis for recognition ofS-adenosylhomocysteine by riboswitches RNA

Compound SAH
Residue . / 55
Chain D / A
Non-redundant False
Interacting RNA chains A/A
Volume 151.61 Å3
Hydrophobicity 0.606
Hydrophilicity 0.788
Buriedness 0.649
Don/acc character 3.574
SiteScore 0.851
D Score 0.861

Compound SAH
Residue . / 55
Chain J / B
Non-redundant False
Interacting RNA chains B/B
Volume 156.75 Å3
Hydrophobicity 0.618
Hydrophilicity 0.726
Buriedness 0.599
Don/acc character 3.740
SiteScore 0.800
D Score 0.813

Compound SAH
Residue . / 55
Chain P / C
Non-redundant True
Interacting RNA chains C/C
Volume 184.53 Å3
Hydrophobicity 0.511
Hydrophilicity 0.680
Buriedness 0.560
Don/acc character 2.986
SiteScore 0.866
D Score 0.912