HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 3npq

System information

Experimental technique X-ray
Experimental resolution 2.18
System mass 56.04 kDa
Deposition year 2010
Molecule type RNA
# RNA entities 1
Organism Ralstonia
RCSB PDB Entry 3npq
Reference Edwards Andrea L., Reyes Francis E., Héroux Annie, Batey Robert T.. . Structural basis for recognition ofS-adenosylhomocysteine by riboswitches RNA

Compound SAH
Residue . / 55
Chain D / A
Non-redundant True
Interacting RNA chains A/A
Volume 153.66 Å3
Hydrophobicity 0.764
Hydrophilicity 0.750
Buriedness 0.649
Don/acc character 3.416
SiteScore 0.999
D Score 0.861

Compound SAH
Residue . / 55
Chain J / B
Non-redundant False
Interacting RNA chains B/B
Volume 157.09 Å3
Hydrophobicity 0.792
Hydrophilicity 0.695
Buriedness 0.597
Don/acc character 4.411
SiteScore 0.955
D Score 0.823

Compound SAH
Residue . / 55
Chain P / C
Non-redundant False
Interacting RNA chains C/C
Volume 184.88 Å3
Hydrophobicity 0.566
Hydrophilicity 0.688
Buriedness 0.564
Don/acc character 2.572
SiteScore 1.038
D Score 0.939