HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 3npq

System information

Experimental technique X-ray
Experimental resolution 2.18
System mass 56.04 kDa
Deposition year 2010
Molecule type RNA
# RNA entities 1
Organism Ralstonia
RCSB PDB Entry 3npq
Reference Edwards Andrea L., Reyes Francis E., Héroux Annie, Batey Robert T.. . Structural basis for recognition ofS-adenosylhomocysteine by riboswitches RNA

Compound SAH
Residue . / 55
Chain D / A
Non-redundant False
Interacting RNA chains A/A
Volume 151.95 Å3
Hydrophobicity 0.983
Hydrophilicity 0.564
Buriedness 0.648
Don/acc character 1.359
SiteScore 0.893
D Score 0.933

Compound SAH
Residue . / 55
Chain J / B
Non-redundant False
Interacting RNA chains B/B
Volume 155.72 Å3
Hydrophobicity 1.043
Hydrophilicity 0.488
Buriedness 0.599
Don/acc character 1.613
SiteScore 0.851
D Score 0.898

Compound SAH
Residue . / 55
Chain P / C
Non-redundant True
Interacting RNA chains C/C
Volume 182.48 Å3
Hydrophobicity 0.781
Hydrophilicity 0.532
Buriedness 0.561
Don/acc character 0.962
SiteScore 0.908
D Score 0.977