Complex 4dr2
System information
Experimental technique | X-ray |
Experimental resolution | 3.25 |
System mass | 802.33 kDa |
Deposition year | 2012 |
Molecule type | RNA/Protein |
# RNA entities | 1 |
Organism | Thermus |
RCSB PDB Entry | 4dr2 |
Reference | Demirci Hasan, Murphy Frank, Murphy Eileen, Gregory Steven T., Dahlberg Albert E., Jogl Gerwald. . A structural basis for streptomycin-induced misreading of the genetic code Nature Communications |
Compound | PAR |
Residue | . / 1601 |
Chain | V / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 149.20 Å3 |
Hydrophobicity | 0.231 |
Hydrophilicity | 1.190 |
Buriedness | 0.716 |
Don/acc character | 0.847 |
SiteScore | 0.700 |
D Score | 0.582 |
Compound | PAR |
Residue | . / 1604 |
Chain | Y / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 1418.30 Å3 |
Hydrophobicity | 0.074 |
Hydrophilicity | 1.204 |
Buriedness | 0.748 |
Don/acc character | 2.603 |
SiteScore | 1.033 |
D Score | 0.996 |
Compound | PAR |
Residue | . / 1608 |
Chain | CA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 46.99 Å3 |
Hydrophobicity | 0.000 |
Hydrophilicity | 2.397 |
Buriedness | 0.934 |
Don/acc character | 0.821 |
SiteScore | 0.776 |
D Score | 0.230 |
Compound | PAR |
Residue | . / 1611 |
Chain | FA / A |
Non-redundant | True |
Interacting RNA chains | A/A |
Volume | - |
Hydrophobicity | - |
Hydrophilicity | - |
Buriedness | - |
Don/acc character | - |
SiteScore | - |
D Score | - |
Compound | PAR |
Residue | . / 1613 |
Chain | HA / A |
Non-redundant | True |
Interacting RNA chains | A/A |
Volume | 159.84 Å3 |
Hydrophobicity | 0.390 |
Hydrophilicity | 1.140 |
Buriedness | 0.708 |
Don/acc character | 2.306 |
SiteScore | 0.841 |
D Score | 0.781 |
Compound | PAR |
Residue | . / 1614 |
Chain | IA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 371.47 Å3 |
Hydrophobicity | 0.026 |
Hydrophilicity | 1.355 |
Buriedness | 0.673 |
Don/acc character | 1.882 |
SiteScore | 0.983 |
D Score | 0.902 |
Compound | PAR |
Residue | . / 1616 |
Chain | KA / A |
Non-redundant | True |
Interacting RNA chains | A/A |
Volume | 267.88 Å3 |
Hydrophobicity | 0.241 |
Hydrophilicity | 1.208 |
Buriedness | 0.723 |
Don/acc character | 0.985 |
SiteScore | 0.906 |
D Score | 0.838 |
Compound | PAR |
Residue | . / 1617 |
Chain | LA / A |
Non-redundant | True |
Interacting RNA chains | A/A |
Volume | 237.36 Å3 |
Hydrophobicity | 0.233 |
Hydrophilicity | 1.084 |
Buriedness | 0.646 |
Don/acc character | 1.926 |
SiteScore | 0.965 |
D Score | 0.974 |