HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 4dr2

System information

Experimental technique X-ray
Experimental resolution 3.25
System mass 802.33 kDa
Deposition year 2012
Molecule type RNA/Protein
# RNA entities 1
Organism Thermus
RCSB PDB Entry 4dr2
Reference Demirci Hasan, Murphy Frank, Murphy Eileen, Gregory Steven T., Dahlberg Albert E., Jogl Gerwald. . A structural basis for streptomycin-induced misreading of the genetic code Nature Communications

Compound PAR
Residue . / 1601
Chain V / A
Non-redundant False
Interacting RNA chains A/A
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound PAR
Residue . / 1604
Chain Y / A
Non-redundant False
Interacting RNA chains A/A
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound PAR
Residue . / 1608
Chain CA / A
Non-redundant False
Interacting RNA chains A/A
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound PAR
Residue . / 1611
Chain FA / A
Non-redundant True
Interacting RNA chains A/A
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound PAR
Residue . / 1613
Chain HA / A
Non-redundant True
Interacting RNA chains A/A
Volume 157.78 Å3
Hydrophobicity 0.356
Hydrophilicity 1.099
Buriedness 0.710
Don/acc character 2.300
SiteScore 0.819
D Score 0.765

Compound PAR
Residue . / 1614
Chain IA / A
Non-redundant False
Interacting RNA chains A/A
Volume 360.84 Å3
Hydrophobicity 0.159
Hydrophilicity 1.327
Buriedness 0.683
Don/acc character 1.004
SiteScore 0.990
D Score 0.917

Compound PAR
Residue . / 1616
Chain KA / A
Non-redundant True
Interacting RNA chains A/A
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound PAR
Residue . / 1617
Chain LA / A
Non-redundant True
Interacting RNA chains A/A
Volume 231.52 Å3
Hydrophobicity 0.025
Hydrophilicity 1.344
Buriedness 0.668
Don/acc character 0.902
SiteScore 0.980
D Score 0.902