HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 3irw

System information

Experimental technique X-ray
Experimental resolution 2.70
System mass 44.67 kDa
Deposition year 2009
Molecule type RNA/Protein
# RNA entities 1
Organism Vibrio
RCSB PDB Entry 3irw
Reference Smith Kathryn D, Lipchock Sarah V, Ames Tyler D, Wang Jimin, Breaker Ronald R, Strobel Scott A. . Structural basis of ligand binding by a c-di-GMP riboswitch Nature Structural & Molecular Biology
Equivalence Class NR_all_12260.5
BGSU version: 4.48

Compound C2E
Residue . / 1
Chain C / R
Non-redundant True
Interacting RNA chains B/R
RNA environment detailled ion
RNA environment global RNA
RNA family chains B/R: riboswitch
RNA family global riboswitch
Volume 427.38 Å3
Hydrophobicity 0.429
Hydrophilicity 1.133
Buriedness 0.696
Don/acc character 0.709
SiteScore 1.149
D Score 0.988
Kd