HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 3td1

System information

Experimental technique X-ray
Experimental resolution 2.10
System mass 15.89 kDa
Deposition year 2011
Molecule type RNA
# RNA entities 1
Organism N/A
RCSB PDB Entry 3td1
Reference Kondo Jiro. . A Structural Basis for the Antibiotic Resistance Conferred by an A1408G Mutation in 16S rRNA and for the Antiprotozoal Activity of Aminoglycosides Angewandte Chemie International Edition

Compound GET
Residue . / 50
Chain C / B
Non-redundant True
Interacting RNA chains A/A, B/B
Volume 125.20 Å3
Hydrophobicity 0.116
Hydrophilicity 0.922
Buriedness 0.592
Don/acc character 1.513
SiteScore 0.833
D Score 0.649

Compound GET
Residue . / 51
Chain D / B
Non-redundant True
Interacting RNA chains A/A, B/B
Volume 94.67 Å3
Hydrophobicity 0.109
Hydrophilicity 0.981
Buriedness 0.583
Don/acc character 0.947
SiteScore 0.797
D Score 0.602