HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 3td1

System information

Experimental technique X-ray
Experimental resolution 2.10
System mass 15.89 kDa
Deposition year 2011
Molecule type RNA
# RNA entities 1
Organism N/A
RCSB PDB Entry 3td1
Reference Kondo Jiro. . A Structural Basis for the Antibiotic Resistance Conferred by an A1408G Mutation in 16S rRNA and for the Antiprotozoal Activity of Aminoglycosides Angewandte Chemie International Edition

Compound GET
Residue . / 50
Chain C / B
Non-redundant True
Interacting RNA chains B/B, A/A
Volume 190.71 Å3
Hydrophobicity 0.128
Hydrophilicity 0.989
Buriedness 0.604
Don/acc character 1.627
SiteScore 0.801
D Score 0.792

Compound GET
Residue . / 51
Chain D / B
Non-redundant True
Interacting RNA chains B/B, A/A
Volume 93.64 Å3
Hydrophobicity 0.096
Hydrophilicity 1.137
Buriedness 0.586
Don/acc character 0.852
SiteScore 0.667
D Score 0.590