Complex 4dr4
System information
Experimental technique | X-ray |
Experimental resolution | 3.97 |
System mass | 809.51 kDa |
Deposition year | 2012 |
Molecule type | RNA/Protein |
# RNA entities | 2 |
Organism | Thermus |
RCSB PDB Entry | 4dr4 |
Reference | Demirci Hasan, Murphy Frank, Murphy Eileen, Gregory Steven T., Dahlberg Albert E., Jogl Gerwald. . A structural basis for streptomycin-induced misreading of the genetic code Nature Communications |
Compound | PAR |
Residue | . / 1601 |
Chain | X / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 174.24 Å3 |
Hydrophobicity | 0.488 |
Hydrophilicity | 1.126 |
Buriedness | 0.739 |
Don/acc character | 1.317 |
SiteScore | 0.775 |
D Score | 0.693 |
Compound | PAR |
Residue | . / 1604 |
Chain | AA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 1463.58 Å3 |
Hydrophobicity | 0.062 |
Hydrophilicity | 1.249 |
Buriedness | 0.765 |
Don/acc character | 2.544 |
SiteScore | 1.045 |
D Score | 0.992 |
Compound | PAR |
Residue | . / 1611 |
Chain | HA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 222.95 Å3 |
Hydrophobicity | 0.307 |
Hydrophilicity | 1.108 |
Buriedness | 0.655 |
Don/acc character | 2.050 |
SiteScore | 0.972 |
D Score | 0.972 |
Compound | PAR |
Residue | . / 1613 |
Chain | JA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 41.85 Å3 |
Hydrophobicity | 0.000 |
Hydrophilicity | 2.334 |
Buriedness | 0.917 |
Don/acc character | 0.724 |
SiteScore | 0.741 |
D Score | 0.210 |
Compound | PAR |
Residue | . / 1615 |
Chain | LA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 333.05 Å3 |
Hydrophobicity | 0.002 |
Hydrophilicity | 1.341 |
Buriedness | 0.651 |
Don/acc character | 2.243 |
SiteScore | 0.969 |
D Score | 0.893 |
Compound | PAR |
Residue | . / 1616 |
Chain | MA / A |
Non-redundant | True |
Interacting RNA chains | A/A |
Volume | - |
Hydrophobicity | - |
Hydrophilicity | - |
Buriedness | - |
Don/acc character | - |
SiteScore | - |
D Score | - |
Compound | PAR |
Residue | . / 1618 |
Chain | OA / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 117.99 Å3 |
Hydrophobicity | 0.379 |
Hydrophilicity | 1.102 |
Buriedness | 0.654 |
Don/acc character | 1.647 |
SiteScore | 0.712 |
D Score | 0.642 |