HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 4dr4

System information

Experimental technique X-ray
Experimental resolution 3.97
System mass 809.51 kDa
Deposition year 2012
Molecule type RNA/Protein
# RNA entities 2
Organism Thermus
RCSB PDB Entry 4dr4
Reference Demirci Hasan, Murphy Frank, Murphy Eileen, Gregory Steven T., Dahlberg Albert E., Jogl Gerwald. . A structural basis for streptomycin-induced misreading of the genetic code Nature Communications

Compound PAR
Residue . / 1601
Chain X / A
Non-redundant False
Interacting RNA chains A/A
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound PAR
Residue . / 1604
Chain AA / A
Non-redundant False
Interacting RNA chains A/A
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound PAR
Residue . / 1611
Chain HA / A
Non-redundant False
Interacting RNA chains A/A
Volume 210.60 Å3
Hydrophobicity 0.195
Hydrophilicity 1.290
Buriedness 0.684
Don/acc character 0.995
SiteScore 0.991
D Score 0.930

Compound PAR
Residue . / 1613
Chain JA / A
Non-redundant False
Interacting RNA chains A/A
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound PAR
Residue . / 1615
Chain LA / A
Non-redundant False
Interacting RNA chains A/A
Volume 322.76 Å3
Hydrophobicity 0.088
Hydrophilicity 1.258
Buriedness 0.660
Don/acc character 0.822
SiteScore 0.975
D Score 0.926

Compound PAR
Residue . / 1616
Chain MA / A
Non-redundant True
Interacting RNA chains A/A
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound PAR
Residue . / 1618
Chain OA / A
Non-redundant False
Interacting RNA chains A/A
Volume 166.70 Å3
Hydrophobicity 0.243
Hydrophilicity 1.056
Buriedness 0.641
Don/acc character 1.331
SiteScore 0.777
D Score 0.744