HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 3l3c

System information

Experimental technique X-ray
Experimental resolution 2.85
System mass 242.44 kDa
Deposition year 2009
Molecule type RNA/Protein
# RNA entities 2
Organism Bacillus
RCSB PDB Entry 3l3c
Reference Cochrane Jesse C., Lipchock Sarah V., Smith Kathryn D., Strobel Scott A.. . Structural and Chemical Basis for Glucosamine 6-Phosphate Binding and Activation of the glmS Ribozyme Biochemistry

Compound G6P
Residue . / 5001
Chain N / P
Non-redundant False
Interacting RNA chains B/E, C/P
Volume 383.82 Å3
Hydrophobicity 0.165
Hydrophilicity 1.504
Buriedness 0.764
Don/acc character 0.813
SiteScore 1.044
D Score 0.908

Compound G6P
Residue . / 5002
Chain S / Q
Non-redundant True
Interacting RNA chains E/F, F/Q
Volume 663.70 Å3
Hydrophobicity 0.210
Hydrophilicity 1.467
Buriedness 0.780
Don/acc character 0.718
SiteScore 1.055
D Score 0.930

Compound G6P
Residue . / 5003
Chain W / G
Non-redundant False
Interacting RNA chains H/G, I/R
Volume 420.52 Å3
Hydrophobicity 0.182
Hydrophilicity 1.452
Buriedness 0.760
Don/acc character 0.878
SiteScore 1.042
D Score 0.923

Compound G6P
Residue . / 5004
Chain BA / H
Non-redundant True
Interacting RNA chains L/S, K/H
Volume 354.32 Å3
Hydrophobicity 0.167
Hydrophilicity 1.552
Buriedness 0.749
Don/acc character 0.575
SiteScore 1.034
D Score 0.883