Complex 3ski
System information
| Experimental technique | X-ray |
| Experimental resolution | 2.30 |
| System mass | 45.40 kDa |
| Deposition year | 2011 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | Mesoplasma |
| RCSB PDB Entry | 3ski |
| Reference | Pikovskaya Olga, Polonskaia Anna, Patel Dinshaw J, Serganov Alexander. . Structural principles of nucleoside selectivity in a 2′-deoxyguanosine riboswitch Nature Chemical Biology |
| Equivalence Class |
NR_all_21705.3
BGSU version: 4.48 |
| Compound | GNG |
| Residue | . / 120 |
| Chain | C / A |
| Non-redundant | True |
| Interacting RNA chains | A/A |
| RNA environment detailled | ion |
| RNA environment global | RNA |
| RNA family chains | A/A: riboswitch |
| RNA family global | riboswitch |
| Volume | 468.54 Å3 |
| Hydrophobicity | 0.099 |
| Hydrophilicity | 1.468 |
| Buriedness | 0.802 |
| Don/acc character | 0.836 |
| SiteScore | 1.219 |
| D Score | 0.942 |
| Kd | — |
| Compound | GNG |
| Residue | . / 120 |
| Chain | M / B |
| Non-redundant | False |
| Interacting RNA chains | B/B |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | B/B: riboswitch |
| RNA family global | riboswitch |
| Volume | 566.29 Å3 |
| Hydrophobicity | 0.074 |
| Hydrophilicity | 1.428 |
| Buriedness | 0.781 |
| Don/acc character | 0.747 |
| SiteScore | 1.205 |
| D Score | 0.943 |
| Kd | — |