HARIBOSS - RNA-SM complexes list

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RNA Polymerase II initial transcribing complex with a 4nt DNA-RNA hybrid and soaked with AMPCPP

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Crystal structure of the pre-catalytic ternary complex of polymerase lambda with a dATP analog opposite a templating T and an rCMP at the primer terminus.

SM: F2A

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Complex structure of viral RNA polymerase form III

SM: GTP

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Coxsackievirus B3 polymerase elongation complex (r2+1_form)

SM: DCT DCT DCT DCT

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Crystal structure of RNASE III complexed with double-stranded RNA AND AMP (TYPE II CLEAVAGE)

SM: AMP AMP

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Human Aprataxin (Aptx) bound to RNA-DNA, AMP, and Zn - product complex

SM: AMP AMP

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Human Aprataxin (Aptx) bound to RNA-DNA and Zn - adenosine vanadate transition state mimic complex

SM: V5A V5A

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Human Aprataxin (Aptx) AOA1 variant K197Q bound to RNA-DNA, AMP, and Zn - product complex

SM: AMP AMP

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Crystal Structure Analysis of the 16mer GCAGACUUAAGUCUGC

SM: SPM

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Crystal structure of RtcA, the RNA 3'-terminal phosphate cyclase from Pyrococcus horikoshii, in complex with rACAAA3'phosphate and adenine.

SM: ADN

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Thermus thermophilus RNA polymerase initially transcribing complex containing 6-mer RNA

SM: ATP

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Crystal structure of the A.fulgidus CCA-adding enzyme in complex with a human MenBeta minihelix ending in CCACC

SM: APC APC

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Crystal structure of the A.fulgidus CCA-adding enzyme in complex with a human MenBeta minihelix ending in CCACC and AMPcPP

SM: 5GP 5GP 5GP APC APC

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Catalysis and 5' end sensing by ribonuclease RNase J of the metallo- beta-lactamase family

SM: C5P

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Dengue virus full length NS5 complexed with viral Cap 0-RNA and SAH

SM: SAH

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Crystal structure of box C/D RNP with 12 nt guide regions and 9 nt substrates

SM: SAH SAH SAH

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Crystal structure of box C/D RNP with 12 nt guide regions and 13 nt substrates

SM: SAH SAH SAH

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Crystal structure of box C/D RNP with 13 nt guide regions and 11 nt substrates

SM: SAH SAH SAH SAH

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Terminal uridylyl transferase 4 from Trypanosoma brucei with bound UTP and UpU

SM: UTP UTP

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Crystal structures of Cy3 cyanine fluorophores stacked onto the end of double-stranded RNA

SM: 96T

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Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 2ntRNA in complex with Rifampin

SM: RFP

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Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 3nt RNA in complex with Rifampin

SM: RFP

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Crystal structure of HCV NS5B genotype 2A JFH-1 isolate with S15G E86Q E87Q C223H V321I mutations and Delta8 neta hairpoin loop deletion in complex with GS-639476 (diphsohate version of GS-9813), Mn2+ and symmetrical primer template 5'-AUAAAUUU

SM: 8B4

5vw1

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Crystal structure of SpyCas9-sgRNA-AcrIIA4 ternary complex

SM: PG4

5w51

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Pol II elongation complex with an N6-methyladenine-containing template and a matched UMPNPP

SM: 2KH

5x21

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Crystal structure of Thermus thermophilus transcription initiation complex with GpA and pseudouridimycin (PUM)

SM: PUM

5x22

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Crystal structure of Thermus thermophilus transcription initiation complex with GpA and CMPcPP

SM: 2TM 2TM

5xi1

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Structural Insight of Flavonoids binding to CAG repeat RNA that causes Huntington's Disease (HD) and Spinocerebellar Ataxia (SCAs)

SM: MYC MYC

5zq0

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Crystal structure of spRlmCD with U747loop RNA

SM: SAH

6aax

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Crystal structure of TFB1M and h45 with SAM in homo sapiens

SM: SAM

6bjy

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VSV Nucleocapsid with Polyamide Bound

SM: DV4

6dtd

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High-resolution crystal structure of Cas13b from Prevotella buccae

SM: CIT PG4 PG4

6hko

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Yeast RNA polymerase I elongation complex bound to nucleotide analog GMPCPP

SM: G2P

6hlq

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Yeast RNA polymerase I* elongation complex bound to nucleotide analog GMPCPP

SM: G2P

6hlr

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Yeast RNA polymerase I elongation complex bound to nucleotide analog GMPCPP (core focused)

SM: G2P

6izp

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Solution structure of the complex of naphthyridine carbamate dimer and an RNA with UGGAA-UGGAA pentad

SM: B2R B2R

6jjh

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Crystal structure of a two-quartet RNA parallel G-quadruplex complexed with the porphyrin TMPyP4

SM: POH POH

6jji

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Crystal structure of a two-quartet RNA parallel G-quadruplex complexed with the porphyrin TMPyP4 (1:1)

SM: POH

6k32

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RdRp complex

SM: UTP

6nbj

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Qri7

SM: ATP

6ogz

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In situ structure of Rotavirus RNA-dependent RNA polymerase at transcript-elongated state

SM: UTP

6oy5

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X-ray crystal structure of a bacterial reiterative transcription complex of pyrG promoter at 3 min

SM: GTP

6oy6

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X-ray crystal structure of a bacterial reiterative transcription complex of pyrG promoter at 5 min

SM: GTP

6p71

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X-ray crystal structure of a bacterial reiterative transcription complex of pyrBI promoter

SM: UTP

6qiq

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Crystal structure of seleno-derivative CAG repeats with synthetic CMBL3a compound

SM: J48 J48

6qir

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Crystal structure of CAG repeats with synthetic CMBL3a compound (model I)

SM: J48 J48 J48 J48

6qit

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Crystal structure of CAG repeats with synthetic CMBL3b compound

SM: J48 J48 J48 J48

6qiv

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Crystal structure of seleno-derivative CAG repeats with synthetic CMBL4 compound

SM: J4H

6rh3

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Cryo-EM structure of E. coli RNA polymerase elongation complex bound to CTP substrate

SM: CTP

6tz2

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In situ structure of BmCPV RNA-dependent RNA polymerase at elongation state

SM: ATP UTP

6wox

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Thermus thermophilus RNA polymerase initially transcribing complex with 2'dCTP

SM: DCP

6woy

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Thermus thermophilus RNA polymerase initially transcribing complex with 3'dCTP

SM: CH1

6xrq

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Structural descriptions of ligand interactions to DNA and RNA quadruplexes folded from the non-coding region of Pseudorabies virus

SM: V8A V8A

7aap

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Nsp7-Nsp8-Nsp12 SARS-CoV2 RNA-dependent RNA polymerase in complex with template:primer dsRNA and favipiravir-RTP

SM: GE6

7ctt

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Cryo-EM structure of Favipiravir bound to replicating polymerase complex of SARS-CoV-2 in the pre-catalytic state.

SM: GE6

7d12

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NMR solution structures of CAG RNA-DB213 binding complex

SM: L94

7d2l

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Crystal structure of the Cas12i1 R-loop complex before target DNA cleavage

SM: CIT

7d3j

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Crystal structure of the Cas12i1 R-loop complex after target DNA cleavage

SM: CIT

7d8c

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Crystal structure of the Cas12i1-crRNA binary complex

SM: CIT

7eu9

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Crystal structure of the selenomethionine(SeMet)-derived Cas12i1 R-loop complex before target DNA cleavage

SM: CIT