HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 6qit

System information

Experimental technique X-ray
Experimental resolution 1.50
System mass 12.26 kDa
Deposition year 2019
Molecule type RNA
# RNA entities 1
Organism Homo
RCSB PDB Entry 6qit
Reference Mukherjee Sanjukta, Błaszczyk Leszek, Rypniewski Wojciech, Falschlunger Christoph, Micura Ronald, Murata Asako, Dohno Chikara, Nakatani Kazuhiko, Kiliszek Agnieszka. . Structural insights into synthetic ligands targeting A–A pairs in disease-related CAG RNA repeats Nucleic Acids Research
Equivalence Class NR_all_99409.3
BGSU version: 4.48

Compound J48
Residue . / 101
Chain E / A
Non-redundant False
Interacting RNA chains B/B, A/A
RNA environment detailled other
RNA environment global RNA/Other
RNA family chains A/A: unknown, B/B: unknown
RNA family global unknown
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -
Kd —

Compound J48
Residue . / 102
Chain F / A
Non-redundant False
Interacting RNA chains B/B, A/A
RNA environment detailled other
RNA environment global RNA/Other
RNA family chains A/A: unknown, B/B: unknown
RNA family global unknown
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -
Kd —

Compound J48
Residue . / 101
Chain G / C
Non-redundant False
Interacting RNA chains D/D, C/C
RNA environment detailled other
RNA environment global RNA/Other
RNA family chains C/C: unknown, D/D: unknown
RNA family global unknown
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -
Kd —

Compound J48
Residue . / 101
Chain H / D
Non-redundant False
Interacting RNA chains D/D, C/C
RNA environment detailled other
RNA environment global RNA/Other
RNA family chains C/C: unknown, D/D: unknown
RNA family global unknown
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -
Kd —