HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 5xi1

System information

Experimental technique Solution NMR
Experimental resolution N/A
System mass 6.41 kDa
Deposition year 2017
Molecule type RNA
# RNA entities 1
Organism Homo
RCSB PDB Entry 5xi1
Reference Khan Eshan, Tawani Arpita, Mishra Subodh Kumar, Verma Arun Kumar, Upadhyay Arun, Kumar Mohit, Sandhir Rajat, Mishra Amit, Kumar Amit. . Myricetin Reduces Toxic Level of CAG Repeats RNA in Huntington’s Disease (HD) and Spino Cerebellar Ataxia (SCAs) ACS Chemical Biology
Molecular Dynamics Simulation mmb-A01WR, mmb-A01XI, mmb-A022A, mmb-A022T
Equivalence Class NR_all_83514.3
BGSU version: 4.48

Compound MYC
Residue . / 101
Chain C / S
Non-redundant False
Interacting RNA chains B/A, A/S
RNA environment detailled RNA-only
RNA environment global RNA
RNA family chains A/S: unknown, B/A: unknown
RNA family global unknown
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -
Kd

Compound MYC
Residue . / 102
Chain D / S
Non-redundant False
Interacting RNA chains B/A, A/S
RNA environment detailled RNA-only
RNA environment global RNA
RNA family chains A/S: unknown, B/A: unknown
RNA family global unknown
Volume 90.21 Å3
Hydrophobicity 0.574
Hydrophilicity 0.684
Buriedness 0.571
Don/acc character 1.537
SiteScore 0.802
D Score 0.634
Kd