Complex 7eu9
Legend
Pocket colors by molecule type
RNA
Protein
DNA
These colors appear when a pocket is selected (the structure fades to show the pocket surface). Colors from the molecule-type palette (RNA / protein / DNA).
System information
| Experimental technique | X-ray |
| Experimental resolution | 2.35 |
| System mass | 166.71 kDa |
| Deposition year | 2021 |
| Molecule type | RNA/DNA/Protein |
| # RNA entities | 1 |
| Organism | N/A |
| RCSB PDB Entry | 7eu9 |
| Reference | Zhang Bo, Luo Diyin, Li Yu, Perčulija Vanja, Chen Jing, Lin Jinying, Ye Yangmiao, Ouyang Songying. 2021. Mechanistic insights into the R-loop formation and cleavage in CRISPR-Cas12i1 Nature Communications |
| Equivalence Class |
NR_all_84549.1
BGSU version: 4.52 |
Pockets List
Legend
Cell colors for SiteScore and D Score:
Favourable
Intermediate
Unfavourable
Not available
| Score | Threshold | Meaning |
|---|---|---|
| SiteScore | < 0.8 | Non-drug binding site |
| SiteScore | 0.8 – 1.0 | Potential drug binding site |
| SiteScore | > 1.0 | Promising binding site |
| D Score | < 0.83 | Undruggable |
| D Score | 0.83 – 0.98 | Difficult |
| D Score | > 0.98 | Druggable |
Tick a pocket below to highlight it in the 3D structure above.
| Compound | CIT |
| Residue | . / 1201 |
| Chain | E / A |
| Non-redundant | True |
| Interacting RNA chains | B/B |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | B/B: unknown |
| RNA family global | unknown |
| Volume | 49.39 Å3 |
| Hydrophobicity | 0.101 |
| Hydrophilicity | 0.634 |
| Buriedness | 0.390 |
| Don/acc character | 1.108 |
| SiteScore | 0.642 |
| D Score | 0.672 |
| Kd | — |