Complex 6qiq
System information
| Experimental technique | X-ray |
| Experimental resolution | 2.52 |
| System mass | 6.28 kDa |
| Deposition year | 2019 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | Homo |
| RCSB PDB Entry | 6qiq |
| Reference | Mukherjee Sanjukta, Błaszczyk Leszek, Rypniewski Wojciech, Falschlunger Christoph, Micura Ronald, Murata Asako, Dohno Chikara, Nakatani Kazuhiko, Kiliszek Agnieszka. . Structural insights into synthetic ligands targeting A–A pairs in disease-related CAG RNA repeats Nucleic Acids Research |
| Equivalence Class |
NR_all_99409.3
BGSU version: 4.48 |
| Compound | J48 |
| Residue | . / 101 |
| Chain | C / A |
| Non-redundant | False |
| Interacting RNA chains | A/A, B/B |
| RNA environment detailled | other |
| RNA environment global | RNA/Other |
| RNA family chains | A/A: unknown, B/B: unknown |
| RNA family global | unknown |
| Volume | 203.40 Å3 |
| Hydrophobicity | 0.792 |
| Hydrophilicity | 0.801 |
| Buriedness | 0.591 |
| Don/acc character | 2.200 |
| SiteScore | 0.937 |
| D Score | 0.985 |
| Kd | — |
| Compound | J48 |
| Residue | . / 101 |
| Chain | D / B |
| Non-redundant | False |
| Interacting RNA chains | A/A, B/B |
| RNA environment detailled | other |
| RNA environment global | RNA/Other |
| RNA family chains | A/A: unknown, B/B: unknown |
| RNA family global | unknown |
| Volume | 228.78 Å3 |
| Hydrophobicity | 0.703 |
| Hydrophilicity | 0.751 |
| Buriedness | 0.578 |
| Don/acc character | 1.623 |
| SiteScore | 0.953 |
| D Score | 1.013 |
| Kd | — |