HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 4k4y

System information

Experimental technique X-ray
Experimental resolution 2.72
System mass 279.20 kDa
Deposition year 2013
Molecule type RNA/DNA/Protein
# RNA entities 1
Organism N/A
RCSB PDB Entry 4k4y
Reference Gong Peng, Kortus Matthew G., Nix Jay C., Davis Ralph E., Peersen Olve B.. . Structures of Coxsackievirus, Rhinovirus, and Poliovirus Polymerase Elongation Complexes Solved by Engineering RNA Mediated Crystal Contacts PLoS ONE
Equivalence Class NR_all_79189.2
BGSU version: 4.48

Compound DCT
Residue . / 501
Chain Q / A
Non-redundant True
Interacting RNA chains B/B
RNA environment detailled DNA, protein, other
RNA environment global RNA/Other
RNA family chains B/B: unknown
RNA family global unknown
Volume 377.99 Å3
Hydrophobicity 0.353
Hydrophilicity 1.323
Buriedness 0.847
Don/acc character 0.562
SiteScore 0.890
D Score 0.748
Kd —

Compound DCT
Residue . / 501
Chain V / E
Non-redundant True
Interacting RNA chains F/F
RNA environment detailled DNA, protein, other
RNA environment global RNA/Other
RNA family chains F/F: unknown
RNA family global unknown
Volume 478.83 Å3
Hydrophobicity 0.547
Hydrophilicity 1.303
Buriedness 0.848
Don/acc character 0.918
SiteScore 0.968
D Score 0.854
Kd —

Compound DCT
Residue . / 501
Chain AA / I
Non-redundant True
Interacting RNA chains J/J
RNA environment detailled DNA, protein, other
RNA environment global RNA/Other
RNA family chains J/J: unknown
RNA family global unknown
Volume 248.33 Å3
Hydrophobicity 0.807
Hydrophilicity 1.267
Buriedness 0.862
Don/acc character 0.586
SiteScore 0.895
D Score 0.769
Kd —

Compound DCT
Residue . / 501
Chain FA / M
Non-redundant True
Interacting RNA chains N/N
RNA environment detailled DNA, protein, other
RNA environment global RNA/Other
RNA family chains N/N: unknown
RNA family global unknown
Volume 279.55 Å3
Hydrophobicity 0.499
Hydrophilicity 1.280
Buriedness 0.859
Don/acc character 0.647
SiteScore 0.888
D Score 0.756
Kd —