Complex 6izp
System information
| Experimental technique | Solution NMR |
| Experimental resolution | N/A |
| System mass | 10.33 kDa |
| Deposition year | 2018 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | Homo |
| RCSB PDB Entry | 6izp |
| Reference | Shibata Tomonori, Nagano Konami, Ueyama Morio, Ninomiya Kensuke, Hirose Tetsuro, Nagai Yoshitaka, Ishikawa Kinya, Kawai Gota, Nakatani Kazuhiko. . Small molecule targeting r(UGGAA)n disrupts RNA foci and alleviates disease phenotype in Drosophila model Nature Communications |
| Equivalence Class |
NR_all_51853.1
BGSU version: 4.48 |
| Compound | B2R |
| Residue | . / 101 |
| Chain | B / A |
| Non-redundant | True |
| Interacting RNA chains | A/A |
| RNA environment detailled | other |
| RNA environment global | RNA/Other |
| RNA family chains | A/A: unknown |
| RNA family global | unknown |
| Volume | 47.33 Å3 |
| Hydrophobicity | 0.294 |
| Hydrophilicity | 1.027 |
| Buriedness | 0.602 |
| Don/acc character | 0.776 |
| SiteScore | 0.640 |
| D Score | 0.391 |
| Kd | — |
| Compound | B2R |
| Residue | . / 102 |
| Chain | C / A |
| Non-redundant | False |
| Interacting RNA chains | A/A |
| RNA environment detailled | other |
| RNA environment global | RNA/Other |
| RNA family chains | A/A: unknown |
| RNA family global | unknown |
| Volume | 56.94 Å3 |
| Hydrophobicity | 0.094 |
| Hydrophilicity | 1.088 |
| Buriedness | 0.550 |
| Don/acc character | 1.960 |
| SiteScore | 0.670 |
| D Score | 0.426 |
| Kd | — |