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Harnessing RIBOnucleic acid - Small molecules Structures

RNA-SM complexes

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1215 RNA-SM complexes found
Structure of complex 8c3a

8c3a

Crystal structure of ailanthone bound to the Candida albicans 80S ribosome

SM: 3K5 3K5 TIX TIX

Structure of complex 8ca7

8ca7

Omadacycline and spectinomycin bound to the 30S ribosomal subunit head

SM: SCM U3B

Structure of complex 8cai

8cai

Streptomycin and Hygromycin B bound to the 30S body

SM: 5I0 HY0 HY0 HY0 SCM

Structure of complex 8cbm

8cbm

Structure of human mitochondrial CCA-adding enzyme in complex with mitochondrial pre-tRNA-Ile

SM: CDP

Structure of complex 8cep

8cep

Kasugamycin bound to the 30S body

SM: KSG

Structure of complex 8ceu

8ceu

Retapamulin and Capreomycin bound to the 50S subunit

SM: G34

Structure of complex 8cf1

8cf1

Tetracycline bound to the 30S head

SM: TAC

Structure of complex 8cf5

8cf5

Translocation intermediate 1 (TI-1) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin

SM: GTP

Structure of complex 8cf8

8cf8

Eravacycline bound to the 30S head

SM: YQM

Structure of complex 8cgd

8cgd

Clindamycin bound to the 50S subunit

SM: AM2 CLY

Structure of complex 8cgi

8cgi

Pentacycline TP038 bound to the 30S head

SM: P8F

Structure of complex 8cgj

8cgj

Streptomycin bound to the 30S body

SM: 5I0 TAC

Structure of complex 8cgk

8cgk

Lincomycin and Avilamycin bound to the 50S subunit

SM: 3QB

Structure of complex 8cgr

8cgr

Apramycin bound to the 30S body

SM: AM2 AM2 AM2

Structure of complex 8cgu

8cgu

Gentamicin bound to the 30S body

SM: LLL LLL LLL LLL

Structure of complex 8cgv

8cgv

Tiamulin bound to the 50S subunit

SM: MUL P8F P8F

Structure of complex 8cku

8cku

Translocation intermediate 1 (TI-1*) of 80S S. cerevisiae ribosome with ligands and eEF2 in the absence of sordarin

SM: GTP

Structure of complex 8cq7

8cq7

Crystal structure of phyllanthoside bound to the Candida albicans 80S ribosome

SM: 3K5 3K5

Structure of complex 8cqw

8cqw

Crystal structure of the Candida albicans 80S ribosome in complex with Hygromycin B

SM: 3K5 3K5 HYG HYG

Structure of complex 8cre

8cre

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

SM: 3K5 3K5 GET GET

Structure of complex 8crx

8crx

Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound

SM: V7A V7A

Structure of complex 8csr

8csr

Human mitochondrial small subunit assembly intermediate (State C)

SM: NAD

Structure of complex 8css

8css

Human mitochondrial small subunit assembly intermediate (State D)

SM: NAD

Structure of complex 8cst

8cst

Human mitochondrial small subunit assembly intermediate (State E)

SM: NAD

Structure of complex 8csu

8csu

Human mitochondrial small subunit assembly intermediate (State C*)

SM: NAD

Structure of complex 8cvm

8cvm

Cutibacterium acnes 50S ribosomal subunit with P-site tRNA and Sarecycline bound in the local refined map

SM: V7A

Structure of complex 8cvo

8cvo

Cutibacterium acnes 30S ribosomal subunit with Sarecycline bound, head domain only in the local refined map

SM: V7A

Structure of complex 8e30

8e30

E. coli 50S ribosome bound to compound streptogramin A analog 3142

SM: UE6

Structure of complex 8e32

8e32

E. coli 50S ribosome bound to compound streptogramin analogs SA1 and SB1

SM: UCX UDF

Structure of complex 8e36

8e36

E. coli 50S ribosome bound to compound streptogramin A analog 3146

SM: UEC

Structure of complex 8e3o

8e3o

E. coli 50S ribosome bound to solithromycin and VM1

SM: EM1 VIR

Structure of complex 8e41

8e41

E. coli 50S ribosome bound to tiamulin and VS1

SM: MUL

Structure of complex 8e42

8e42

E. coli 50S ribosome bound to tiamulin and azithromycin

SM: MUL ZIT

Structure of complex 8e43

8e43

E. coli 50S ribosome bound to compound streptogramin A analog 3336

SM: UI0

Structure of complex 8e44

8e44

E. coli 50S ribosome bound to antibiotic analog SLC09

SM: UI9

Structure of complex 8e48

8e48

E. coli 50S ribosome bound to antibiotic analog SLC30

SM: UIF

Structure of complex 8e49

8e49

E. coli 50S ribosome bound to antibiotic analog SLC31

SM: UH0

Structure of complex 8eiu

8eiu

E. coli 70S ribosome with A-loop mutations U2554C and U2555C

SM: PAR SPM

Structure of complex 8ekc

8ekc

Escherichia coli 70S ribosome bound to thermorubin, deacylated P-site tRNAfMet and aminoacylated A-site Phe-tRNA

SM: T8B

Structure of complex 8emm

8emm

Composite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substrates

SM: PAR SPM

Structure of complex 8ev6

8ev6

Crystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAs

SM: AKN AKN AKN AKN AKN AKN AKN AKN

Structure of complex 8ev7

8ev7

Crystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAs

SM: KAN KAN KAN KAN KAN KAN KAN

Structure of complex 8evr

8evr

Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure II

SM: GDP

Structure of complex 8fc1

8fc1

Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and erythromycin at 2.50A resolution

SM: ARG ARG ERY ERY HGR HGR

Structure of complex 8fc2

8fc2

Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and azithromycin at 2.50A resolution

SM: ARG ARG HGR HGR ZIT ZIT

Structure of complex 8fc3

8fc3

Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and telithromycin at 2.60A resolution

SM: ARG ARG HGR HGR TEL TEL

Structure of complex 8fc4

8fc4

Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and erythromycin at 2.45A resolution

SM: ARG ARG ERY HGR HGR

Structure of complex 8fc5

8fc5

Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and azithromycin at 2.65A resolution

SM: ARG ARG HGR HGR ZIT ZIT

Structure of complex 8fc6

8fc6

Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and telithromycin at 2.35A resolution

SM: ARG ARG HGR HGR TEL TEL

Structure of complex 8fl2

8fl2

Human nuclear pre-60S ribosomal subunit (State I1)

SM: GTP

Structure of complex 8fl3

8fl3

Human nuclear pre-60S ribosomal subunit (State I2)

SM: GTP

Structure of complex 8fl4

8fl4

Human nuclear pre-60S ribosomal subunit (State I3)

SM: GTP

Structure of complex 8fto

8fto

E. coli 70S ribosome with an improved MS2 tag inserted in H98

SM: FME

Structure of complex 8fvy

8fvy

40S subunit of the Giardia lamblia 80S ribosome

SM: YAT

Structure of complex 8fzf

8fzf

Cryo-EM structure of an E. coli rotated ribosome complex bound with RF3-ppGpp and p/E-tRNAPhe (Composite state I-C)

SM: G4P

Structure of complex 8fzi

8fzi

Cryo-EM structure of an E. coli rotated ribosome bound with RF3-GDPCP and p/E-tRNAPhe (Composite state II-B)

SM: GCP

Structure of complex 8fzj

8fzj

Cryo-EM structure of an E. coli rotated ribosome bound with RF3-GDPCP and p/E-tRNAPhe (Composite state II-C)

SM: GCP

Structure of complex 8g2b

8g2b

Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolution

SM: 6IF 6IF

Structure of complex 8g4i

8g4i

40S ribosomal subunit of the 80S Giardia intestinalis assemblage A ribosome with Emetine bound in V1 conformation

SM: YAT

Structure of complex 8g4s

8g4s

40S ribosomal subunit of the 80S Giardia intestinalis assemblage A ribosome with Emetine bound in V2 conformation with mRNA and three tRNAs.

SM: YAT