HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 8ev7

System information

Experimental technique X-ray
Experimental resolution 2.89
System mass 4560.66 kDa
Deposition year 2022
Molecule type RNA/Protein
# RNA entities 6
Organism Thermus
RCSB PDB Entry 8ev7
Reference Seely Savannah M., Parajuli Narayan P., De Tarafder Arindam, Ge Xueliang, Sanyal Suparna, Gagnon Matthieu G.. . Molecular basis of the pleiotropic effects by the antibiotic amikacin on the ribosome Nature Communications

Compound KAN
Residue . / 3933
Chain ENA / 1A
Non-redundant True
Interacting RNA chains A/1A
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound KAN
Residue . / 3935
Chain GNA / 1A
Non-redundant True
Interacting RNA chains A/1A
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound KAN
Residue . / 1955
Chain FEB / 1a
Non-redundant True
Interacting RNA chains FA/1a
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound KAN
Residue . / 3568
Chain ACC / 2A
Non-redundant True
Interacting RNA chains EB/2A
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound KAN
Residue . / 3569
Chain BCC / 2A
Non-redundant True
Interacting RNA chains EB/2A
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound KAN
Residue . / 1828
Chain JMC / 2a
Non-redundant False
Interacting RNA chains JC/2a
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -