HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 8crx

System information

Experimental technique Electron Microscopy
Experimental resolution 2.78
System mass 2282.92 kDa
Deposition year 2022
Molecule type RNA/Protein
# RNA entities 5
Organism Cutibacterium
RCSB PDB Entry 8crx
Reference Lomakin Ivan B, Devarkar Swapnil C, Patel Shivali, Grada Ayman, Bunick Christopher G. . Sarecycline inhibits protein translation inCutibacterium acnes70S ribosome using a two-site mechanism Nucleic Acids Research

Compound V7A
Residue . / 1601
Chain CB / A
Non-redundant True
Interacting RNA chains A/A, ZA/Y
Volume 139.60 Å3
Hydrophobicity 0.007
Hydrophilicity 1.312
Buriedness 0.723
Don/acc character 1.002
SiteScore 0.786
D Score 0.650

Compound V7A
Residue . / 3101
Chain TE / a
Non-redundant False
Interacting RNA chains WA/a
Volume 440.41 Å3
Hydrophobicity 0.087
Hydrophilicity 1.261
Buriedness 0.693
Don/acc character 1.253
SiteScore 0.996
D Score 0.945