HARIBOSS - RNA-SM complexes list

6uc8

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Guanine riboswitch bound to 8-aminoguanine

SM: ANG

6uc9

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Guanine riboswitch bound to O6-cyclohexylmethyl guanine

SM: CMG

6uet

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SAM-bound SAM-IV riboswitch

SM: SAM

6vui

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Metabolite-bound PreQ1 riboswitch with Mn2+

SM: PRF

6wtl

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Structure of Human pir-miRNA-19b-2 Apical Loop and One-base-pair Fused to the YdaO Riboswitch Scaffold

SM: 2BA 2BA

6wtr

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Structure of Human pir-miRNA-300 Apical Loop Fused to the YdaO Riboswitch Scaffold

SM: 2BA 2BA

6wzr

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Fusibacterium ulcerans ZTP riboswitch bound to p-1-pyridinyl AICA

SM: UG1 UG1

6wzs

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Fusibacterium ulcerans ZTP riboswitch bound to m-1-pyridinyl AICA

SM: UG4 UG4

6xkn

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Class III PreQ1 riboswitch mutant A52G

SM: PRF

6xko

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Class III PreQ1 riboswitch mutant A84G

SM: PRF

6yl5

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Crystal structure of the SAM-SAH riboswitch with SAH

SM: SAH SAH SAH SAH SAH SAH SAH SAH SAH

6ylb

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Crystal structure of the SAM-SAH riboswitch with SAM

SM: SAM SAM SAM SAM SAM SAM SAM SAM SAM

6ymi

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Crystal structure of the SAM-SAH riboswitch with AMP.

SM: AMP AMP AMP AMP AMP AMP AMP AMP AMP CBV CBV

6ymj

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Crystal structure of the SAM-SAH riboswitch with adenosine.

SM: ADN ADN ADN ADN ADN ADN ADN ADN ADN

6ymk

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Crystal structure of the SAM-SAH riboswitch with AMP

SM: MTA MTA MTA MTA MTA MTA MTA MTA MTA

6yml

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Crystal structure of the SAM-SAH riboswitch with decarboxylated SAH

SM: AMP DSH DSH

6ymm

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Crystal structure of the SAM-SAH riboswitch with SAM from space group P312

SM: SAM SAM SAM

7d7v

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Crystal Structure of the Domain1 of NAD+ Riboswitch with nicotinamide adenine dinucleotide (NAD+) and U1A protein

SM: GTP NAD

7d7w

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Crystal Structure of the Domain1 of NAD+ Riboswitch with nicotinamide adenine dinucleotide (NAD+)

SM: GTP NAD

7d7x

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Crystal Structure of the Domain1 of NAD+ Riboswitch with adenosine diphosphate (ADP)

SM: ADP GTP

7d7y

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Crystal Structure of the Domain1 of NAD+ Riboswitch with adenosine triphosphate (ATP)

SM: ATP GTP

7d7z

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Crystal Structure of the Domain1 of NAD+ Riboswitch with nicotinamide adenine dinucleotide (NAD+), soaked in Mn2+

SM: GTP NAD

7d81

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Crystal Structure of the Domain2 of NAD+ Riboswitch with nicotinamide adenine dinucleotide (NAD+)

SM: NAD

7d82

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Crystal Structure of the Domain2 of NAD+ Riboswitch with nicotinamide adenine dinucleotide (NAD+), soaked in Mn2+

SM: NAD

7e9e

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Crystal structure of a class I PreQ1 riboswitch aptamer (ab13-14) complexed with a cognate ligand-derived photoaffinity probe

SM: J0C

7e9i

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Crystal structure of a class I PreQ1 riboswitch aptamer (wild-type) complexed with a cognate ligand-derived photoaffinity probe

SM: J0C

7eaf

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Crystal structure of SAM-I riboswitch with the Actinomyces-1 k-turn

SM: SAM

7elp

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Crystal structure of xanthine riboswitch with xanthine, iridium hexammine soak

SM: GTP

7rex

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PreQ1-1 (type-1) riboswitch in complex with tandem stacked metabolites

SM: PRF PRF PRF PRF PRF PRF

7td7

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Crystal structure of an E. coli thiM riboswitch bound to thiamine, manganese ions

SM: VIB

7tda

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Crystal structure of the E. coli thiM riboswitch in complex with thiamine pyrophosphate, manganese ions

SM: TPP

7tdb

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Crystal structure of the E. coli thiM riboswitch in complex with thiamine bisphosphonate, manganese ions

SM: GMI

7tdc

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Crystal structure of the E. coli thiM riboswitch in complex with thiamine bisphosphonate, calcium ions

SM: GMI

7tzr

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Crystal structure of the E. coli thiM riboswitch bound to N-methyl-1-(quinoxalin-6-yl)methanamine (compound 16)

SM: KWU KWU

7tzt

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Crystal structure of the E. coli thiM riboswitch in complex with N1,N1-dimethyl-N2-(quinoxalin-6-ylmethyl)ethane-1,2-diamine (linked compound 37)

SM: KXC

7tzu

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Crystal structure of the E. coli thiM riboswitch bound to 1-(4-(piperazin-1-yl)pyridin-3-yl)-N-(quinoxalin-6-ylmethyl)methanamine (linked compound 38)

SM: KWL

7wi9

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The THF-II riboswitch bound to THF and soaking with SeUrea

SM: THG

7wib

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The THF-II riboswitch bound to THF

SM: THG

7wif

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The THF-II riboswitch bound to H4B

SM: H4B

7wii

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The THF-II riboswitch bound to NPR

SM: NPR

8f4o

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Apo structure of the TPP riboswitch aptamer domain

SM: PG4

8fb3

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PreQ1-1 (type-1) riboswitch with stacked metabolites and a C10-G34 base pair in the expression platform

SM: PRF PRF PRF PRF PRF PRF

8fza

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Class I type III preQ1 riboswitch from E. coli

SM: PRF PRF

8gxb

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Crystal structure of NAD+ -II riboswitch in complex with NAD+

SM: NAD NAD

8gxc

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Crystal structure of NAD+ -II riboswitch in complex with NMN

SM: NMN NMN

8hb1

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Crystal structure of NAD-II riboswitch (two strands) with NMN

SM: NMN NMN

8hb3

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Crystal structure of NAD-II riboswitch (two strands) with NR

SM: NNR NNR

8hb8

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Crystal structure of NAD-II riboswitch (single strand) with NMN

SM: NMN NMN

8hba

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Crystal structure of NAD-II riboswitch (single strand) with NAD

SM: NAD NAD NAD NMN

8i3z

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Crystal structure of NAD-II riboswitch (two strands) with NMN at 1.67 angstrom

SM: NMN NMN

8keb

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Crystal structure of 2'-dG-III riboswitch with 2'-dG

SM: GNG

8khh

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Crystal structure of 2'-dG-III riboswitch with guanosine

SM: GMP GMP

8toz

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Class III PreQ1 riboswitch double mutant U8C/A85G

SM: PRF

8uiw

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yjdF riboswitch from R. gauvreauii in complex with chelerythrine bound to Fab BL3-6 S97N

SM: CTI CTI

8uta

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yjdF riboswitch from R. gauvreauii in complex with proflavine bound to Fab BL3-6 S97N

SM: PRL PRL

8vpv

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Class III PreQ1 riboswitch mutant delta84

SM: PRF

8vqv

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Structure of S. odontolytica ZTP riboswitch bound to m-1-pyridinyl-AICA

SM: UG4

8vvj

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Structure of S. odontolytica ZTP riboswitch bound to m-1-pyridinyl-AICA

SM: A1AD3

8xze

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Crystal structure of THF-II riboswitch with THF and soaked with Ir

SM: SPM THG

8xzl

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Crystal structure of folE riboswitch with DHF

SM: DHF SPM