Complex 8fb3
System information
| Experimental technique | X-ray |
| Experimental resolution | 3.00 |
| System mass | 33.70 kDa |
| Deposition year | 2022 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | Carnobacterium |
| RCSB PDB Entry | 8fb3 |
| Reference | Schroeder Griffin M, Akinyemi Olayinka, Malik Jeffrey, Focht Caroline M, Pritchett Elizabeth M, Baker Cameron D, McSally James P, Jenkins Jermaine L, Mathews David H, Wedekind Joseph E. . A riboswitch separated from its ribosome-binding site still regulates translation Nucleic Acids Research |
| Compound | PRF |
| Residue | . / 101 |
| Chain | H / B |
| Non-redundant | False |
| Interacting RNA chains | B/B |
| RNA environment detailled | other |
| RNA environment global | RNA/Other |
| RNA family chains | B/B: riboswitch |
| RNA family global | riboswitch |
| Volume | 358.09 Å3 |
| Hydrophobicity | 0.402 |
| Hydrophilicity | 1.459 |
| Buriedness | 0.738 |
| Don/acc character | 0.674 |
| SiteScore | 1.176 |
| D Score | 0.907 |
| Kd | — |
| Compound | PRF |
| Residue | . / 101 |
| Chain | D / A |
| Non-redundant | False |
| Interacting RNA chains | A/A |
| RNA environment detailled | other |
| RNA environment global | RNA/Other |
| RNA family chains | A/A: riboswitch |
| RNA family global | riboswitch |
| Volume | 293.95 Å3 |
| Hydrophobicity | 0.485 |
| Hydrophilicity | 1.279 |
| Buriedness | 0.730 |
| Don/acc character | 0.668 |
| SiteScore | 1.102 |
| D Score | 0.872 |
| Kd | — |
| Compound | PRF |
| Residue | . / 102 |
| Chain | E / A |
| Non-redundant | False |
| Interacting RNA chains | A/A |
| RNA environment detailled | other |
| RNA environment global | RNA/Other |
| RNA family chains | A/A: riboswitch |
| RNA family global | riboswitch |
| Volume | 326.88 Å3 |
| Hydrophobicity | 0.704 |
| Hydrophilicity | 1.375 |
| Buriedness | 0.769 |
| Don/acc character | 0.849 |
| SiteScore | 0.545 |
| D Score | 0.919 |
| Kd | — |
| Compound | PRF |
| Residue | . / 102 |
| Chain | I / B |
| Non-redundant | False |
| Interacting RNA chains | B/B |
| RNA environment detailled | other |
| RNA environment global | RNA/Other |
| RNA family chains | B/B: riboswitch |
| RNA family global | riboswitch |
| Volume | 376.96 Å3 |
| Hydrophobicity | 0.541 |
| Hydrophilicity | 1.124 |
| Buriedness | 0.702 |
| Don/acc character | 0.908 |
| SiteScore | 1.153 |
| D Score | 0.995 |
| Kd | — |
| Compound | PRF |
| Residue | . / 101 |
| Chain | J / C |
| Non-redundant | False |
| Interacting RNA chains | C/C |
| RNA environment detailled | other |
| RNA environment global | RNA/Other |
| RNA family chains | C/C: riboswitch |
| RNA family global | riboswitch |
| Volume | 265.48 Å3 |
| Hydrophobicity | 0.593 |
| Hydrophilicity | 1.284 |
| Buriedness | 0.725 |
| Don/acc character | 0.540 |
| SiteScore | 1.044 |
| D Score | 0.797 |
| Kd | — |
| Compound | PRF |
| Residue | . / 102 |
| Chain | K / C |
| Non-redundant | False |
| Interacting RNA chains | C/C |
| RNA environment detailled | other |
| RNA environment global | RNA/Other |
| RNA family chains | C/C: riboswitch |
| RNA family global | riboswitch |
| Volume | 395.48 Å3 |
| Hydrophobicity | 0.545 |
| Hydrophilicity | 1.014 |
| Buriedness | 0.683 |
| Don/acc character | 1.136 |
| SiteScore | 1.145 |
| D Score | 1.019 |
| Kd | — |