HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 8gxb

System information

Experimental technique X-ray
Experimental resolution 2.15
System mass 97.43 kDa
Deposition year 2022
Molecule type RNA/Protein
# RNA entities 1
Organism Streptococcus
RCSB PDB Entry 8gxb
Reference Xu Xiaochen, Egger Michaela, Li Chunyan, Chen Hao, Micura Ronald, Ren Aiming. . Structure-based investigations of the NAD+-II riboswitch Nucleic Acids Research

Compound NAD
Residue . / 101
Chain H / A
Non-redundant True
Interacting RNA chains A/A
Volume 140.97 Å3
Hydrophobicity 0.496
Hydrophilicity 0.859
Buriedness 0.647
Don/acc character 3.380
SiteScore 0.845
D Score 0.849

Compound NAD
Residue . / 101
Chain S / B
Non-redundant True
Interacting RNA chains B/B
Volume 192.42 Å3
Hydrophobicity 0.407
Hydrophilicity 0.970
Buriedness 0.664
Don/acc character 3.554
SiteScore 1.096
D Score 0.964