HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 8hb3

System information

Experimental technique X-ray
Experimental resolution 2.87
System mass 18.35 kDa
Deposition year 2022
Molecule type RNA
# RNA entities 1
Organism Streptococcus
RCSB PDB Entry 8hb3
Reference Peng Xuemei, Liao Wenjian, Lin Xiaowei, Lilley David M J, Huang Lin. . Crystal structures of the NAD+-II riboswitch reveal two distinct ligand-binding pockets Nucleic Acids Research
Equivalence Class NR_all_83957.3
BGSU version: 4.48

Compound NNR
Residue . / 101
Chain C / A
Non-redundant True
Interacting RNA chains B/B, A/A
RNA environment detailled RNA-only
RNA environment global RNA
RNA family chains A/A: riboswitch, B/B: riboswitch
RNA family global riboswitch
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -
Kd

Compound NNR
Residue . / 101
Chain D / B
Non-redundant False
Interacting RNA chains B/B, A/A
RNA environment detailled RNA-only
RNA environment global RNA
RNA family chains A/A: riboswitch, B/B: riboswitch
RNA family global riboswitch
Volume 241.13 Å3
Hydrophobicity 0.161
Hydrophilicity 1.305
Buriedness 0.664
Don/acc character 1.456
SiteScore 1.124
D Score 0.908
Kd