Complex 7tdb
System information
| Experimental technique | X-ray |
| Experimental resolution | 2.56 |
| System mass | 27.59 kDa |
| Deposition year | 2021 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | Escherichia |
| RCSB PDB Entry | 7tdb |
| Reference | Zeller Meredith J., Nuthanakanti Ashok, Li Kelin, Aubé Jeffrey, Serganov Alexander, Weeks Kevin M.. . Subsite Ligand Recognition and Cooperativity in the TPP Riboswitch: Implications for Fragment-Linking in RNA Ligand Discovery ACS Chemical Biology |
| Equivalence Class |
NR_all_42241.5
BGSU version: 4.49 |
| Compound | GMI |
| Residue | . / 101 |
| Chain | B / A |
| Non-redundant | False |
| Interacting RNA chains | A/A |
| RNA environment detailled | ion |
| RNA environment global | RNA |
| RNA family chains | A/A: riboswitch |
| RNA family global | riboswitch |
| Volume | 789.59 Å3 |
| Hydrophobicity | 0.129 |
| Hydrophilicity | 1.327 |
| Buriedness | 0.750 |
| Don/acc character | 1.169 |
| SiteScore | 1.185 |
| D Score | 0.958 |
| Kd | — |