Complex 6ylb
System information
Experimental technique | X-ray |
Experimental resolution | 2.12 |
System mass | 71.30 kDa |
Deposition year | 2020 |
Molecule type | RNA |
# RNA entities | 1 |
Organism | Roseobacter |
RCSB PDB Entry | 6ylb |
Reference | Huang Lin, Liao Ting-Wei, Wang Jia, Ha Taekjip, Lilley David M J. . Crystal structure and ligand-induced folding of the SAM/SAH riboswitch Nucleic Acids Research |
Compound | SAM |
Residue | . / 101 |
Chain | O / C |
Non-redundant | True |
Interacting RNA chains | J/N, C/C, D/D |
Volume | 400.62 Å3 |
Hydrophobicity | 0.311 |
Hydrophilicity | 1.140 |
Buriedness | 0.685 |
Don/acc character | 1.127 |
SiteScore | 0.991 |
D Score | 0.979 |
Compound | SAM |
Residue | . / 101 |
Chain | R / I |
Non-redundant | True |
Interacting RNA chains | G/I, H/J, B/B |
Volume | 338.20 Å3 |
Hydrophobicity | 0.469 |
Hydrophilicity | 1.018 |
Buriedness | 0.679 |
Don/acc character | 0.801 |
SiteScore | 0.992 |
D Score | 1.016 |
Compound | SAM |
Residue | . / 101 |
Chain | U / O |
Non-redundant | True |
Interacting RNA chains | F/G, L/P, K/O |
Volume | 366.32 Å3 |
Hydrophobicity | 0.175 |
Hydrophilicity | 1.123 |
Buriedness | 0.673 |
Don/acc character | 0.878 |
SiteScore | 0.983 |
D Score | 0.978 |