Complex 7tdc
System information
| Experimental technique | X-ray |
| Experimental resolution | 2.46 |
| System mass | 27.42 kDa |
| Deposition year | 2021 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | Escherichia |
| RCSB PDB Entry | 7tdc |
| Reference | Zeller Meredith J., Nuthanakanti Ashok, Li Kelin, Aubé Jeffrey, Serganov Alexander, Weeks Kevin M.. . Subsite Ligand Recognition and Cooperativity in the TPP Riboswitch: Implications for Fragment-Linking in RNA Ligand Discovery ACS Chemical Biology |
| Equivalence Class |
NR_all_42241.5
BGSU version: 4.49 |
| Compound | GMI |
| Residue | . / 101 |
| Chain | B / A |
| Non-redundant | True |
| Interacting RNA chains | A/A |
| RNA environment detailled | ion |
| RNA environment global | RNA |
| RNA family chains | A/A: riboswitch |
| RNA family global | riboswitch |
| Volume | 776.21 Å3 |
| Hydrophobicity | 0.111 |
| Hydrophilicity | 1.332 |
| Buriedness | 0.757 |
| Don/acc character | 1.561 |
| SiteScore | 1.190 |
| D Score | 0.960 |
| Kd | — |