HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 6ymj

System information

Experimental technique X-ray
Experimental resolution 2.04
System mass 71.02 kDa
Deposition year 2020
Molecule type RNA
# RNA entities 1
Organism Roseobacter
RCSB PDB Entry 6ymj
Reference Huang Lin, Liao Ting-Wei, Wang Jia, Ha Taekjip, Lilley David M J. . Crystal structure and ligand-induced folding of the SAM/SAH riboswitch Nucleic Acids Research

Compound ADN
Residue . / 102
Chain Q / C
Non-redundant True
Interacting RNA chains D/D, C/C
Volume 418.80 Å3
Hydrophobicity 0.361
Hydrophilicity 1.030
Buriedness 0.629
Don/acc character 1.919
SiteScore 0.956
D Score 0.981

Compound ADN
Residue . / 201
Chain U / I
Non-redundant True
Interacting RNA chains H/J, G/I
Volume 369.07 Å3
Hydrophobicity 0.409
Hydrophilicity 1.064
Buriedness 0.675
Don/acc character 1.625
SiteScore 0.984
D Score 0.998

Compound ADN
Residue . / 102
Chain AA / O
Non-redundant True
Interacting RNA chains L/P, K/O
Volume 320.36 Å3
Hydrophobicity 0.590
Hydrophilicity 1.038
Buriedness 0.690
Don/acc character 1.731
SiteScore 0.995
D Score 1.016