HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 6ymj

System information

Experimental technique X-ray
Experimental resolution 2.04
System mass 71.02 kDa
Deposition year 2020
Molecule type RNA
# RNA entities 1
Organism Roseobacter
RCSB PDB Entry 6ymj
Reference Huang Lin, Liao Ting-Wei, Wang Jia, Ha Taekjip, Lilley David M J. . Crystal structure and ligand-induced folding of the SAM/SAH riboswitch Nucleic Acids Research

Compound ADN
Residue . / 102
Chain R / C
Non-redundant True
Interacting RNA chains C/C, D/D
Volume 397.54 Å3
Hydrophobicity 0.372
Hydrophilicity 1.054
Buriedness 0.663
Don/acc character 1.255
SiteScore 0.977
D Score 0.994

Compound ADN
Residue . / 102
Chain X / I
Non-redundant True
Interacting RNA chains H/J, G/I
Volume 363.24 Å3
Hydrophobicity 0.356
Hydrophilicity 1.083
Buriedness 0.686
Don/acc character 0.925
SiteScore 0.992
D Score 0.999

Compound ADN
Residue . / 102
Chain EA / O
Non-redundant True
Interacting RNA chains L/P, K/O
Volume 342.31 Å3
Hydrophobicity 0.381
Hydrophilicity 1.153
Buriedness 0.685
Don/acc character 1.031
SiteScore 0.991
D Score 0.975