HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 8hb1

System information

Experimental technique X-ray
Experimental resolution 2.23
System mass 18.28 kDa
Deposition year 2022
Molecule type RNA
# RNA entities 1
Organism Streptococcus
RCSB PDB Entry 8hb1
Reference Peng Xuemei, Liao Wenjian, Lin Xiaowei, Lilley David M J, Huang Lin. . Crystal structures of the NAD+-II riboswitch reveal two distinct ligand-binding pockets Nucleic Acids Research

Compound NMN
Residue . / 101
Chain F / B
Non-redundant True
Interacting RNA chains A/A, B/B
Volume 148.18 Å3
Hydrophobicity 0.481
Hydrophilicity 0.920
Buriedness 0.666
Don/acc character 3.691
SiteScore 0.869
D Score 0.869

Compound NMN
Residue . / 102
Chain G / B
Non-redundant True
Interacting RNA chains A/A, B/B
Volume 263.77 Å3
Hydrophobicity 0.112
Hydrophilicity 1.393
Buriedness 0.692
Don/acc character 1.456
SiteScore 0.996
D Score 0.901