HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 8gxc

System information

Experimental technique X-ray
Experimental resolution 2.50
System mass 96.70 kDa
Deposition year 2022
Molecule type RNA/Protein
# RNA entities 1
Organism Streptococcus
RCSB PDB Entry 8gxc
Reference Xu Xiaochen, Egger Michaela, Li Chunyan, Chen Hao, Micura Ronald, Ren Aiming. . Structure-based investigations of the NAD+-II riboswitch Nucleic Acids Research

Compound NMN
Residue . / 101
Chain H / A
Non-redundant True
Interacting RNA chains A/A
Volume 149.55 Å3
Hydrophobicity 0.480
Hydrophilicity 0.898
Buriedness 0.661
Don/acc character 2.931
SiteScore 1.033
D Score 0.890

Compound NMN
Residue . / 101
Chain O / B
Non-redundant False
Interacting RNA chains B/B
Volume 137.54 Å3
Hydrophobicity 0.507
Hydrophilicity 0.975
Buriedness 0.667
Don/acc character 2.901
SiteScore 1.000
D Score 0.841