HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 8hb8

System information

Experimental technique X-ray
Experimental resolution 2.30
System mass 19.46 kDa
Deposition year 2022
Molecule type RNA
# RNA entities 1
Organism Streptococcus
RCSB PDB Entry 8hb8
Reference Peng Xuemei, Liao Wenjian, Lin Xiaowei, Lilley David M J, Huang Lin. . Crystal structures of the NAD+-II riboswitch reveal two distinct ligand-binding pockets Nucleic Acids Research

Compound NMN
Residue . / 101
Chain B / A
Non-redundant True
Interacting RNA chains A/A
Volume 134.11 Å3
Hydrophobicity 0.460
Hydrophilicity 0.951
Buriedness 0.669
Don/acc character 3.502
SiteScore 0.861
D Score 0.855

Compound NMN
Residue . / 102
Chain C / A
Non-redundant False
Interacting RNA chains A/A
Volume 256.56 Å3
Hydrophobicity 0.409
Hydrophilicity 1.319
Buriedness 0.657
Don/acc character 1.502
SiteScore 0.973
D Score 0.904