Complex 6yl5
System information
Experimental technique | X-ray |
Experimental resolution | 1.70 |
System mass | 140.16 kDa |
Deposition year | 2020 |
Molecule type | RNA |
# RNA entities | 1 |
Organism | Roseobacter |
RCSB PDB Entry | 6yl5 |
Reference | Huang Lin, Liao Ting-Wei, Wang Jia, Ha Taekjip, Lilley David M J. . Crystal structure and ligand-induced folding of the SAM/SAH riboswitch Nucleic Acids Research |
Compound | SAH |
Residue | . / 101 |
Chain | W / C |
Non-redundant | True |
Interacting RNA chains | C/C, J/J, D/D |
Volume | 428.41 Å3 |
Hydrophobicity | 0.304 |
Hydrophilicity | 1.159 |
Buriedness | 0.670 |
Don/acc character | 1.178 |
SiteScore | 0.981 |
D Score | 0.964 |
Compound | SAH |
Residue | . / 101 |
Chain | FA / G |
Non-redundant | True |
Interacting RNA chains | B/B, G/G, H/H |
Volume | 378.33 Å3 |
Hydrophobicity | 0.366 |
Hydrophilicity | 1.095 |
Buriedness | 0.663 |
Don/acc character | 1.096 |
SiteScore | 0.977 |
D Score | 0.981 |
Compound | SAH |
Residue | . / 101 |
Chain | NA / K |
Non-redundant | True |
Interacting RNA chains | K/K, L/L, F/F |
Volume | 359.81 Å3 |
Hydrophobicity | 0.292 |
Hydrophilicity | 1.019 |
Buriedness | 0.654 |
Don/acc character | 1.104 |
SiteScore | 0.975 |
D Score | 1.000 |