Complex 6yl5
System information
Experimental technique | X-ray |
Experimental resolution | 1.70 |
System mass | 140.16 kDa |
Deposition year | 2020 |
Molecule type | RNA |
# RNA entities | 1 |
Organism | Roseobacter |
RCSB PDB Entry | 6yl5 |
Reference | Huang Lin, Liao Ting-Wei, Wang Jia, Ha Taekjip, Lilley David M J. . Crystal structure and ligand-induced folding of the SAM/SAH riboswitch Nucleic Acids Research |
Compound | SAH |
Residue | . / 101 |
Chain | W / C |
Non-redundant | True |
Interacting RNA chains | J/J, D/D, C/C |
Volume | 432.87 Å3 |
Hydrophobicity | 0.277 |
Hydrophilicity | 1.073 |
Buriedness | 0.640 |
Don/acc character | 1.742 |
SiteScore | 0.961 |
D Score | 0.974 |
Compound | SAH |
Residue | . / 101 |
Chain | FA / G |
Non-redundant | True |
Interacting RNA chains | B/B, G/G, H/H |
Volume | 374.21 Å3 |
Hydrophobicity | 0.344 |
Hydrophilicity | 1.038 |
Buriedness | 0.647 |
Don/acc character | 1.981 |
SiteScore | 0.966 |
D Score | 0.990 |
Compound | SAH |
Residue | . / 101 |
Chain | NA / K |
Non-redundant | True |
Interacting RNA chains | L/L, F/F, K/K |
Volume | 366.32 Å3 |
Hydrophobicity | 0.307 |
Hydrophilicity | 0.993 |
Buriedness | 0.634 |
Don/acc character | 1.429 |
SiteScore | 0.967 |
D Score | 0.997 |