HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 6yl5

System information

Experimental technique X-ray
Experimental resolution 1.70
System mass 140.16 kDa
Deposition year 2020
Molecule type RNA
# RNA entities 1
Organism Roseobacter
RCSB PDB Entry 6yl5
Reference Huang Lin, Liao Ting-Wei, Wang Jia, Ha Taekjip, Lilley David M J. . Crystal structure and ligand-induced folding of the SAM/SAH riboswitch Nucleic Acids Research

Compound SAH
Residue . / 101
Chain W / C
Non-redundant True
Interacting RNA chains J/J, D/D, C/C
Volume 432.87 Å3
Hydrophobicity 0.277
Hydrophilicity 1.073
Buriedness 0.640
Don/acc character 1.742
SiteScore 0.961
D Score 0.974

Compound SAH
Residue . / 101
Chain FA / G
Non-redundant True
Interacting RNA chains B/B, G/G, H/H
Volume 374.21 Å3
Hydrophobicity 0.344
Hydrophilicity 1.038
Buriedness 0.647
Don/acc character 1.981
SiteScore 0.966
D Score 0.990

Compound SAH
Residue . / 101
Chain NA / K
Non-redundant True
Interacting RNA chains L/L, F/F, K/K
Volume 366.32 Å3
Hydrophobicity 0.307
Hydrophilicity 0.993
Buriedness 0.634
Don/acc character 1.429
SiteScore 0.967
D Score 0.997