Harnessing RIBOnucleic acid - Small molecules Structures
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Crystal Structure of the G20A/C92U mutant c-di-GMP riboswith bound to c-di-GMP
SM: C2E
Crystal Structure of the G20A/C92U mutant c-di-GMP riboswith bound to c-di-AMP
SM: 2BA
Native structure of a c-di-GMP riboswitch from V. cholerae
Structure of the s-adenosylhomocysteine riboswitch at 3.0A
SM: SAH
Structure of the S-adenosylhomocysteine riboswitch at 2.18 A
SM: SAH SAH SAH
Structure of a c-di-GMP-II riboswitch from C. acetobutylicum bound to c-di-GMP
SM: C2E C2E C2E C2E
Structural analysis of a class I PreQ1 riboswitch aptamer in the metabolite-bound state
SM: PRF
Crystal structure of guanine riboswitch C61U/G37A double mutant bound to thio-guanine
SM: DX4 DX4 DX4 DX4
The structure of the tetrahydrofolate riboswitch containing a U25C mutation
SM: FFO
Crystal structure of the 2'- Deoxyguanosine riboswitch bound to 2'-deoxyguanosine
SM: GNG GNG
Crystal structure of the 2'- deoxyguanosine riboswitch bound to 2'-deoxyguanosine, iridium hexammine soak
Crystal structure of the 2'- Deoxyguanosine riboswitch bound to 2'- Deoxyguanosine, cobalt Hexammine soak
Crystal structure of the 2'- Deoxyguanosine riboswitch bound to 2'- Deoxyguanosine, manganese Soak
Crystal structure of the 2'- Deoxyguanosine riboswitch bound to 2'- Deoxyguanosine, cesium soak
Crystal structure of the 2'- deoxyguanosine riboswitch bound to guanosine
SM: GMP GMP
Crystal structure of the 2'- Deoxyguanosine riboswitch bound to 2'-deoxyguanosine-5'-monophosphate
SM: DGP DGP
Crystal structure of the 2'- Deoxyguanosine riboswitch bound to guanosine-5'-monophosphate
SM: 5GP 5GP
Crystal structure of THF riboswitch, bound with 5-formyl-THF
Crystal structure of THF riboswitch, bound with THF
SM: THF
Structure of a Riboswitch-like RNA-ligand complex from the Hepatitis C Virus Internal Ribosome Entry Site
SM: SS0
Crystal structure of YbxF bound to the SAM-I riboswitch aptamer
SM: SAM SAM
SAM-I riboswitch containing the T. solenopsae Kt-23 in complex with S- adenosyl methionine
SM: SAM
SAM-I riboswitch bearing the H. marismortui K-t-7
Structure of a class II preQ1 riboswitch reveals ligand recognition by a new fold
Bacillus subtilis yitJ S box/SAM-I riboswitch
Structure of the SAM-I/IV riboswitch (env87(deltaU92, deltaG93))
Structure of the THF riboswitch
SM: FFO FFO
Structure of the THF riboswitch bound to tetrahydrobiopterin
SM: H4B H4B
Structure of the THF riboswitch bound to pemetrexed
SM: LYA LYA
X-ray crystal structure of the M6" riboswitch aptamer bound to pyrimido[4,5-d]pyrimidine-2,4-diamine (PPDA)
SM: 29G
X-ray crystal structure of the M6C" riboswitch aptamer bound to 2-aminopyrimido[4,5-d]pyrimidin-4(3H)-one (PPAO)
SM: 29H
Crystal structure of the E. coli thiM riboswitch in complex with 5-(azidomethyl)-2-methylpyrimidin-4-amine
SM: 2QB 2QB
Crystal structure of the E. coli thiM riboswitch in complex with (4-(1,2,3-thiadiazol-4-yl)phenyl)methanamine
SM: 2QC
Crystal structure of the E. coli thiM riboswitch in complex with thiamine
SM: VIB
Structure of the SAM-I/IV riboswitch (env87(deltaU92))
Thermoanaerobacter pseudethanolicus c-di-AMP riboswitch
SM: 2BA 2BA
Thermovirga lienii c-di-AMP riboswitch
c-di-AMP riboswitch from Thermoanaerobacter pseudethanolicus, iridium hexamine soak
ydao riboswitch binding to c-di-AMP
structure of ydao riboswitch binding with c-di-dAMP
Crystal Structure of a PreQ1 Riboswitch
Crystal structure of Bacillus subtilis cyclic-di-AMP riboswitch ydaO
Crystal structure of the ZMP riboswitch at 2.50 angstrom
SM: AMZ
Crystal structure of the ZMP riboswitch at 1.80 angstrom
Lactococcus lactis yybP-ykoY Mn riboswitch bound to Mn2+
SM: GTP GTP
Lactococcus lactis yybP-ykoY Mn riboswitch A41U binding site mutant in presence of Mn2+
An Escherichia coli yybP-ykoY Mn riboswitch in the Mn2+-free state
3',3'-cGAMP riboswitch bound with 3',3'-cGAMP
SM: 4BW 4BW
3',3'-cGAMP riboswitch bound with c-di-GMP
SM: C2E C2E
20A Mutant c-di-GMP Vc2 Riboswitch bound with 3',3'-cGAMP
SM: 4BW
The structure of A pfI Riboswitch Bound to ZMP
SM: AMZ AMZ
Fusobacterium ulcerans ZTP riboswitch bound to ZMP
Selective Small Molecule Inhibition of the FMN Riboswitch
SM: 51B
PreQ1-II riboswitch with an engineered G-U wobble pair bound to Cs+
SM: PRF PRF PRF PRF
SAM-I riboswitch bearing the H. marismortui Kt-7 variant C-2bU
SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is UG
SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is GG
SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is CC
SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is UU
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Filter entries " Experimental resolution " between the two values. Global DB range: 0.6 – 11.2
Filter entries " Molecular weight (compound) " between the two values. Global DB range: 150 – 1000
Filter entries " Deposition date " between the two values. Global DB range: 1986 – 2027
Filter entries " Molecular weight (complex) " between the two values. Global DB range: 0 – 13090
Filter entries " Number of atoms " between the two values. Global DB range: 5 – 70
Filter entries " Number of interacting chains " between the two values. Global DB range: 1 – 4
Filter entries " Pocket size " between the two values. Global DB range: 15.9 – 394.0
Filter entries " SiteScore " between the two values. Global DB range: 0.3 – 1.3
Filter entries " Dscore " between the two values. Global DB range: -0.1 – 1.4
Filter entries " Exposure " between the two values. Global DB range: 0.1 – 1.0
Filter entries " Enclosure " between the two values. Global DB range: 0.3 – 1.0
Filter entries " Hydrophobicity " between the two values. Global DB range: 0.0 – 3.1
Filter entries " Hydrophilicity " between the two values. Global DB range: 0.2 – 2.8
Filter entries " Donor/Acceptor " between the two values. Global DB range: 0.0 – 5.0
Filter entries " Volume " between the two values. Global DB range: 21.2 – 1528.8
