HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 5d5l

System information

Experimental technique X-ray
Experimental resolution 2.50
System mass 104.74 kDa
Deposition year 2015
Molecule type RNA
# RNA entities 1
Organism Lacticaseibacillus
RCSB PDB Entry 5d5l

Compound PRF
Residue . / 117
Chain U / A
Non-redundant False
Interacting RNA chains A/A
Volume 96.38 Å3
Hydrophobicity 0.849
Hydrophilicity 0.775
Buriedness 0.634
Don/acc character 1.244
SiteScore 0.656
D Score 0.616

Compound PRF
Residue . / 109
Chain JA / B
Non-redundant False
Interacting RNA chains B/B
Volume 97.07 Å3
Hydrophobicity 0.743
Hydrophilicity 0.755
Buriedness 0.629
Don/acc character 0.950
SiteScore 0.684
D Score 0.655

Compound PRF
Residue . / 104
Chain QA / C
Non-redundant False
Interacting RNA chains C/C
Volume 86.09 Å3
Hydrophobicity 0.561
Hydrophilicity 0.848
Buriedness 0.619
Don/acc character 0.779
SiteScore 0.673
D Score 0.635

Compound PRF
Residue . / 106
Chain ZA / D
Non-redundant False
Interacting RNA chains D/D
Volume 85.41 Å3
Hydrophobicity 0.681
Hydrophilicity 0.784
Buriedness 0.630
Don/acc character 0.778
SiteScore 0.645
D Score 0.602