HARIBOSS - RNA-SM complexes list

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Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure

SM: GTP

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Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure

SM: GTP

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Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure

SM: GTP

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Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure

SM: GTP

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Structure of Candida albicans 80S ribosome in complex with cephaeline

SM: K16 K16 K16 SPK

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E167K RF2 on E. coli 70S release complex with UAA

SM: SPM SPM

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mt-SSU assembly intermediate in GTPBP8 knock-out cells, state 1

SM: NAD SPM SRY

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mt-SSU assembly intermediate in GTPBP8 knock-out cells, state 2

SM: NAD

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mt-SSU assembly intermediate in GTPBP8 knock-out cells, state 3

SM: NAD SPM SRY

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mt-SSU in GTPBP8 knock-out cells, state 4

SM: NAD SPM SRY

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Human 60S ribosomal subunit

SM: ATP SPM SPM SPM SPM SPM

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Human mitochondrial ribosome in complex with antibiotic tigecycline

SM: T1C T1C T1C

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YlmH bound to PtRNA-50S

SM: CLM

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Terminating ribosome with SRI-41315

SM: ZVM

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Cryo-EM structure of the Escherichia coli 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAs

SM: AKN AKN

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Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, A-site tRNA, messenger RNA and eIF5A, PRE

SM: 3HE

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Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, and A-site tRNA, messenger RNA, PRE

SM: 3HE

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Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, and A-site tRNA, messenger RNA, POST

SM: 3HE

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Hypomethylated yeast 80S bound with cycloheximide, unmodified U2921, mid rotated

SM: 3HE

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Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, sordarin, and hibernating factor Los2

SM: GDP

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Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure II

SM: GDP

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Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure IV

SM: GDP

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Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site formyl-MAI-tripeptidyl-tRNA analog ACCA-IAMf at 2.65A resolution

SM: ARG ARG

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Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site formyl-MFI-tripeptidyl-tRNA analog ACCA-IFMf at 2.60A resolution

SM: ARG ARG

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Eukaryotic 80S ribosome with Reh1, eIF5A and A/P site tRNA

SM: 3HE

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Eukaryotic 80S ribosome with Reh1 and A/P site tRNA

SM: 3HE

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Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with spectinomycin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.60A resolution

SM: SCM SCM

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Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with spectinomycin derivative 2694, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.75A resolution

SM: Y7K Y7K

8vpk

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Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX and erythromycin:50S-HflX-B-Ery

SM: ERY

8vr4

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Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX and erythromycin:50S-HflX-A-Ery

SM: ERY

8vr8

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Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX and chloramphenicol:50S-HflX-B-Clm

SM: CLM

8vrl

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Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX and chloramphenicol:50S-HflX-A-Clm

SM: CLM

8vtw

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Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-128 and protein Y at 2.35A resolution

SM: ARG ARG

8vty

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Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with ciprofloxacin and protein Y at 2.60A resolution

SM: ARG ARG CPF CPF

8vvp

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Codon sampling state obtained from Anisomycin-treated mammalian ribosomes

SM: ANM SPM SPM

8vvq

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Codon sampling state of elongation inhibitor-treated mammalian ribosomes obtained from merged datasets

SM: 5GP ANM

8vvr

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Post-decoding/Post-hydrolysis state obtained from Anisomycin-treated mammalian ribosomes

SM: ANM

8vvs

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Post-decoding post-hydrolysis state obtained from merged datasets of elongation inhibitor-treated mammalian ribosomes

SM: ANM

8vvt

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Mammalian ribosomes bound to Anisomycin in the rotated conformation

SM: ANM

8vvu

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Anisomycin-bound mammalian ribosome with partially accommodated A-site tRNA

SM: ANM

8xsx

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Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA, SERBP1 and eEF2

SM: T1C T1C T1C T1C T1C T1C T1C

8xsy

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Cryo-EM structure of the human 80S ribosome with Tigecycline, e-tRNA and CCDC124 (40S head Swivelled)

SM: T1C T1C T1C T1C T1C T1C T1C T1C

8xsz

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Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA and P-tRNA

SM: T1C T1C T1C T1C T1C

8xt0

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Cryo-EM structure of the human 55S mitoribosome with 5um Tigecycline

SM: T1C T1C T1C

8xt1

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Cryo-EM structure of the human 39S mitoribosome with 5uM Tigecycline

SM: T1C

8xt2

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Cryo-EM structure of the human 55S mitoribosome with 10uM Tigecycline

SM: T1C T1C T1C

8xt3

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Cryo-EM structure of the human 39S mitoribosome with 10uM Tigecycline

SM: T1C

8xz3

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Mycobacterium smegmatis 50S ribosomal subunit with Erythromycin

SM: ERY

8y36

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cryo-EM structure of Staphylococcus aureus(ATCC 29213) 50S ribosome in complex with MCX-190.

SM: A1D6G

8y37

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Cryo-EM structure of Staphylococcus aureus (15B196) 50S ribosome in complex with MCX-190.

SM: A1D6G

8y38

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Cryo-EM structure of Staphylococcus aureus 70S ribosome (strain 15B196) in complex with MCX-190.

SM: A1D6G

8y39

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cryo-EM structure of Staphylococcus aureus(ATCC 29213) 70S ribosome in complex with MCX-190.

SM: A1D6G

8y5k

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E.coli transcription translation coupling complex in TTC-A state 2 containing mRNA with 27-mer spacer, NusG, NusA, fMet-tRNA(iMet), Phe-tRNA(Phe), and viomycin

SM: GDP

8y5m

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E.coli transcription translation coupling complex in TTC-B state 2 containing mRNA with 27-mer spacer, NusG, NusA, fMet-tRNA(iMet), Phe-tRNA(Phe), and viomycin

SM: GDP

8y5n

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E.coli transcription translation coupling complex in TTC-A state 3 containing mRNA with 21-mer spacer, NusG, NusA, fMet-tRNA(iMet), Phe-tRNA(Phe), and viomycin

SM: GDP

8y5o

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E.coli transcription translation coupling complex in TTC-B state 3 (subclass1) containing mRNA with 30-mer spacer, NusG, NusA, fMet-tRNA(iMet), Phe-tRNA(Phe), and viomycin

SM: GDP

8y5p

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E.coli transcription translation coupling complex in TTC-B state 4 (subclass 1) containing mRNA with 24-mer spacer, NusG, NusA, fMet-tRNA(iMet), Phe-tRNA(Phe), and viomycin

SM: GDP

8y5q

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E.coli transcription translation coupling complex in TTC-B state 4 (subclass 2) containing mRNA with 27-mer spacer, NusG, NusA, fMet-tRNA(iMet), Phe-tRNA(Phe), and GDPCP

SM: GCP

8y5r

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E.coli Transcription translation coupling complex in TTC-B state 5 (subclass 1) containing mRNA with 27-mer spacer, NusG, NusA, fMet-tRNA(iMet), Phe-tRNA(Phe), and fusidic acid

SM: FUA

8y5t

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E.coli Transcription translation coupling complex in TTC-B state 5 (subclass 3) containing mRNA with 27-mer spacer, NusG, NusA, fMet-tRNA(iMet), Phe-tRNA(Phe), and fusidic acid

SM: FUA