HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 8rri

System information

Experimental technique Electron Microscopy
Experimental resolution 2.40
System mass 2944.82 kDa
Deposition year 2024
Molecule type RNA/Protein
# RNA entities 1
Organism Homo
RCSB PDB Entry 8rri
Reference Shao Qiuya, Khawaja Anas, Nguyen Minh Duc, Singh Vivek, Zhang Jingdian, Liu Yong, Nordin Joel, Adori Monika, Axel Innis C., Castro Dopico Xaquin, Rorbach Joanna. . T cell toxicity induced by tigecycline binding to the mitochondrial ribosome Nature Communications

Compound T1C
Residue . / 1701
Chain SC / AA
Non-redundant True
Interacting RNA chains EC/AA
Volume 219.18 Å3
Hydrophobicity 0.135
Hydrophilicity 1.181
Buriedness 0.730
Don/acc character 3.116
SiteScore 0.678
D Score 0.633

Compound T1C
Residue . / 3301
Chain SD / A
Non-redundant True
Interacting RNA chains FC/A
Volume 751.86 Å3
Hydrophobicity 0.128
Hydrophilicity 1.263
Buriedness 0.670
Don/acc character 1.185
SiteScore 1.132
D Score 0.931

Compound T1C
Residue . / 3302
Chain TD / A
Non-redundant True
Interacting RNA chains HC/Ax, FC/A
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -