HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 8xsy

System information

Experimental technique Electron Microscopy
Experimental resolution 3.00
System mass 4007.70 kDa
Deposition year 2024
Molecule type RNA/Protein
# RNA entities 4
Organism Homo
RCSB PDB Entry 8xsy
Reference Li Xiang, Wang Mengjiao, Denk Timo, Buschauer Robert, Li Yi, Beckmann Roland, Cheng Jingdong. . Structural basis for differential inhibition of eukaryotic ribosomes by tigecycline Nature Communications

Compound T1C
Residue . / 5313
Chain MK / L5
Non-redundant False
Interacting RNA chains A/L5, C/L8
Volume 445.56 Å3
Hydrophobicity 0.184
Hydrophilicity 1.100
Buriedness 0.685
Don/acc character 1.771
SiteScore 0.991
D Score 0.992

Compound T1C
Residue . / 5314
Chain NK / L5
Non-redundant False
Interacting RNA chains A/L5
Volume 483.29 Å3
Hydrophobicity 0.194
Hydrophilicity 1.159
Buriedness 0.694
Don/acc character 1.455
SiteScore 0.997
D Score 0.979