Complex 8vvp
System information
| Experimental technique | Electron Microscopy |
| Experimental resolution | 2.90 |
| System mass | 3559.11 kDa |
| Deposition year | 2024 |
| Molecule type | RNA/Protein |
| # RNA entities | 1 |
| Organism | Bos |
| RCSB PDB Entry | 8vvp |
| Equivalence Class |
NR_all_06650.50,
NR_all_21280.51,
NR_all_44051.2
BGSU version: 4.49 |
| Compound | ANM |
| Residue | . / 5250 |
| Chain | UI / WA |
| Non-redundant | True |
| Interacting RNA chains | VA/WA |
| RNA environment detailled | protein, ion |
| RNA environment global | RNA/Protein |
| RNA family chains | VA/WA: mRNA |
| RNA family global | mRNA |
| Volume | 671.94 Å3 |
| Hydrophobicity | 0.445 |
| Hydrophilicity | 1.287 |
| Buriedness | 0.832 |
| Don/acc character | 1.232 |
| SiteScore | 1.240 |
| D Score | 1.020 |
| Kd | — |
| Compound | SPM |
| Residue | . / 5252 |
| Chain | WI / WA |
| Non-redundant | True |
| Interacting RNA chains | VA/WA |
| RNA environment detailled | protein, ion |
| RNA environment global | RNA/Protein |
| RNA family chains | VA/WA: mRNA |
| RNA family global | mRNA |
| Volume | 728.88 Å3 |
| Hydrophobicity | 0.205 |
| Hydrophilicity | 1.517 |
| Buriedness | 0.886 |
| Don/acc character | 1.258 |
| SiteScore | 1.125 |
| D Score | 0.977 |
| Kd | — |
| Compound | SPM |
| Residue | . / 1955 |
| Chain | CM / ZA |
| Non-redundant | True |
| Interacting RNA chains | YA/ZA |
| RNA environment detailled | ion |
| RNA environment global | RNA |
| RNA family chains | YA/ZA: rRNA |
| RNA family global | rRNA |
| Volume | 656.16 Å3 |
| Hydrophobicity | 0.321 |
| Hydrophilicity | 1.035 |
| Buriedness | 0.768 |
| Don/acc character | 2.832 |
| SiteScore | 1.198 |
| D Score | 1.063 |
| Kd | — |