HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 8y36

System information

Experimental technique Electron Microscopy
Experimental resolution 2.65
System mass 1334.26 kDa
Deposition year 2024
Molecule type RNA/Protein
# RNA entities 1
Organism Staphylococcus
RCSB PDB Entry 8y36
Reference Ma Cong-Xuan, Li Ye, Liu Wen-Tian, Li Yun, Zhao Fei, Lian Xiao-Tian, Ding Jing, Liu Si-Meng, Liu Xie-Peng, Fan Bing-Zhi, Liu Li-Yong, Xue Feng, Li Jian, Zhang Jue-Ru, Xue Zhao, Pei Xiao-Tong, Lin Jin-Zhong, Liang Jian-Hua. . Synthetic macrolides overcoming MLSBK-resistant pathogens Cell Discovery
Equivalence Class NR_all_90633.29
BGSU version: 4.48

Compound A1D6G
Residue . / 3001
Chain EA / A
Non-redundant True
Interacting RNA chains A/A
RNA environment detailled protein, ion
RNA environment global RNA/Protein
RNA family chains A/A: rRNA
RNA family global rRNA
Volume 580.70 Å3
Hydrophobicity 0.240
Hydrophilicity 1.210
Buriedness 0.753
Don/acc character 1.247
SiteScore 1.187
D Score 0.997
Kd