HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 8xt0

System information

Experimental technique Electron Microscopy
Experimental resolution 3.20
System mass 2888.61 kDa
Deposition year 2024
Molecule type RNA/Protein
# RNA entities 2
Organism Homo
RCSB PDB Entry 8xt0
Reference Li Xiang, Wang Mengjiao, Denk Timo, Buschauer Robert, Li Yi, Beckmann Roland, Cheng Jingdong. . Structural basis for differential inhibition of eukaryotic ribosomes by tigecycline Nature Communications

Compound T1C
Residue . / 1707
Chain HG / L1
Non-redundant False
Interacting RNA chains A/L1
Volume 1090.40 Å3
Hydrophobicity 0.253
Hydrophilicity 1.038
Buriedness 0.708
Don/acc character 1.845
SiteScore 1.007
D Score 1.026

Compound T1C
Residue . / 1708
Chain IG / L1
Non-redundant False
Interacting RNA chains A/L1
Volume 484.66 Å3
Hydrophobicity 0.212
Hydrophilicity 1.030
Buriedness 0.669
Don/acc character 2.486
SiteScore 0.983
D Score 1.006

Compound T1C
Residue . / 1034
Chain EI / S1
Non-redundant False
Interacting RNA chains EC/S1
Volume 157.09 Å3
Hydrophobicity 0.040
Hydrophilicity 1.160
Buriedness 0.757
Don/acc character 1.318
SiteScore 0.855
D Score 0.779