HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 8xsz

System information

Experimental technique Electron Microscopy
Experimental resolution 3.20
System mass 3982.70 kDa
Deposition year 2024
Molecule type RNA/Protein
# RNA entities 5
Organism Homo
RCSB PDB Entry 8xsz
Reference Li Xiang, Wang Mengjiao, Denk Timo, Buschauer Robert, Li Yi, Beckmann Roland, Cheng Jingdong. . Structural basis for differential inhibition of eukaryotic ribosomes by tigecycline Nature Communications

Compound T1C
Residue . / 5310
Chain JK / L5
Non-redundant True
Interacting RNA chains C/L8, A/L5
Volume 342.66 Å3
Hydrophobicity 0.242
Hydrophilicity 1.082
Buriedness 0.704
Don/acc character 1.799
SiteScore 0.970
D Score 0.967

Compound T1C
Residue . / 5311
Chain KK / L5
Non-redundant False
Interacting RNA chains A/L5
Volume 481.57 Å3
Hydrophobicity 0.230
Hydrophilicity 1.188
Buriedness 0.691
Don/acc character 2.133
SiteScore 0.995
D Score 0.967