HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 8xt2

System information

Experimental technique Electron Microscopy
Experimental resolution 3.30
System mass 2888.61 kDa
Deposition year 2024
Molecule type RNA/Protein
# RNA entities 1
Organism Homo
RCSB PDB Entry 8xt2
Reference Li Xiang, Wang Mengjiao, Denk Timo, Buschauer Robert, Li Yi, Beckmann Roland, Cheng Jingdong. . Structural basis for differential inhibition of eukaryotic ribosomes by tigecycline Nature Communications

Compound T1C
Residue . / 1705
Chain FG / L1
Non-redundant True
Interacting RNA chains A/L1
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound T1C
Residue . / 1706
Chain GG / L1
Non-redundant True
Interacting RNA chains A/L1
Volume 355.35 Å3
Hydrophobicity 0.358
Hydrophilicity 0.982
Buriedness 0.720
Don/acc character 2.486
SiteScore 1.176
D Score 1.052

Compound T1C
Residue . / 1034
Chain EI / S1
Non-redundant True
Interacting RNA chains EC/S1
Volume 296.70 Å3
Hydrophobicity 0.234
Hydrophilicity 1.025
Buriedness 0.739
Don/acc character 1.822
SiteScore 1.103
D Score 0.950