HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 8xt2

System information

Experimental technique Electron Microscopy
Experimental resolution 3.30
System mass 2888.61 kDa
Deposition year 2024
Molecule type RNA/Protein
# RNA entities 2
Organism Homo
RCSB PDB Entry 8xt2
Reference Li Xiang, Wang Mengjiao, Denk Timo, Buschauer Robert, Li Yi, Beckmann Roland, Cheng Jingdong. . Structural basis for differential inhibition of eukaryotic ribosomes by tigecycline Nature Communications

Compound T1C
Residue . / 1705
Chain FG / L1
Non-redundant False
Interacting RNA chains A/L1
Volume 1154.54 Å3
Hydrophobicity 0.277
Hydrophilicity 1.094
Buriedness 0.710
Don/acc character 1.989
SiteScore 1.008
D Score 1.010

Compound T1C
Residue . / 1706
Chain GG / L1
Non-redundant False
Interacting RNA chains A/L1
Volume 346.43 Å3
Hydrophobicity 0.238
Hydrophilicity 1.108
Buriedness 0.709
Don/acc character 2.331
SiteScore 1.007
D Score 1.004

Compound T1C
Residue . / 1034
Chain EI / S1
Non-redundant False
Interacting RNA chains EC/S1
Volume 150.92 Å3
Hydrophobicity 0.000
Hydrophilicity 1.156
Buriedness 0.762
Don/acc character 0.978
SiteScore 0.887
D Score 0.820