HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 8vpk

System information

Experimental technique Electron Microscopy
Experimental resolution 2.63
System mass 1537.48 kDa
Deposition year 2024
Molecule type RNA/Protein
# RNA entities 1
Organism Mycolicibacterium
RCSB PDB Entry 8vpk
Reference Majumdar Soneya, Kashyap Amuliya, Koripella Ravi K., Sharma Manjuli R., Hurst-Hess Kelley, Manjari Swati R., Banavali Nilesh K., Ghosh Pallavi, Agrawal Rajendra K.. . HflX-mediated drug resistance through ribosome splitting and rRNA disordering in mycobacteria Proceedings of the National Academy of Sciences
Equivalence Class NR_all_76090.17
BGSU version: 4.48

Compound ERY
Residue . / 3201
Chain KA / A
Non-redundant True
Interacting RNA chains D/A
RNA environment detailled RNA-only
RNA environment global RNA
RNA family chains D/A: rRNA
RNA family global rRNA
Volume 347.12 Å3
Hydrophobicity 0.117
Hydrophilicity 1.371
Buriedness 0.830
Don/acc character 1.758
SiteScore 1.153
D Score 0.881
Kd