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Harnessing RIBOnucleic acid - Small molecules Structures

RNA-SM complexes

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964 RNA-SM complexes found
filters used:  RNA family global: rRNA  
Structure of complex 7p3k

7p3k

Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control)

SM: CLM

Structure of complex 7p7q

7p7q

E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume

SM: SCM

Structure of complex 7p7r

7p7r

PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I

SM: SCM

Structure of complex 7p7s

7p7s

PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state II

SM: SCM

Structure of complex 7p7t

7p7t

PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state III

SM: SCM

Structure of complex 7p7u

7p7u

E. faecalis 70S ribosome with P-tRNA, state IV

SM: SCM

Structure of complex 7pd3

7pd3

Structure of the human mitoribosomal large subunit in complex with NSUN4.MTERF4.GTPBP7 and MALSU1.L0R8F8.mt-ACP

SM: GCP

Structure of complex 7phb

7phb

70S ribosome with A- and P-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells

SM: CLM

Structure of complex 7pib

7pib

70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells

SM: SCM

Structure of complex 7pjs

7pjs

Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)

SM: AM2 AM2 AM2 AM2

Structure of complex 7pjt

7pjt

Structure of the 70S ribosome with tRNAs in hybrid state 1 (H1)

SM: AM2

Structure of complex 7pju

7pju

Structure of the 70S ribosome with tRNAs in hybrid state 2 (H2)

SM: AM2

Structure of complex 7pjv

7pjv

Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP-Pi)

SM: AM2 AM2 AM2 GDP

Structure of complex 7pjw

7pjw

Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G-GDP-Pi)

SM: AM2 GDP

Structure of complex 7pjx

7pjx

Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP)

SM: AM2

Structure of complex 7pjy

7pjy

Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP)

SM: AM2 AM2 AM2 AM2

Structure of complex 7pjz

7pjz

Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 2 (CHI2-EF-G-GDP)

SM: AM2

Structure of complex 7pnx

7pnx

Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation a

SM: NAD

Structure of complex 7pny

7pny

Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation b

SM: NAD

Structure of complex 7pnz

7pnz

Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation c

SM: NAD

Structure of complex 7po0

7po0

Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and IF3

SM: NAD

Structure of complex 7pub

7pub

Late assembly intermediate of the Trypanosoma brucei mitoribosomal small subunit

SM: UTP

Structure of complex 7q08

7q08

Structure of Candida albicans 80S ribosome in complex with cycloheximide

SM: 3HE

Structure of complex 7q0f

7q0f

Structure of Candida albicans 80S ribosome in complex with phyllanthoside

SM: 3K5

Structure of complex 7q0p

7q0p

Structure of the Candida albicans 80S ribosome in complex with anisomycin

SM: ANM

Structure of complex 7q0r

7q0r

Structure of the Candida albicans 80S ribosome in complex with blasticidin s

SM: BLS

Structure of complex 7q4k

7q4k

Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chain

SM: ERY

Structure of complex 7qi4

7qi4

Human mitochondrial ribosome at 2.2 A resolution (bound to partly built tRNAs and mRNA)

SM: NAD SPM

Structure of complex 7qi5

7qi5

Human mitochondrial ribosome in complex with mRNA, A/A-, P/P- and E/E-tRNAs at 2.63 A resolution

SM: NAD SPM

Structure of complex 7qi6

7qi6

Human mitochondrial ribosome in complex with mRNA, A/P- and P/E-tRNAs at 2.98 A resolution

SM: NAD SPM

Structure of complex 7qiw

7qiw

Specific features and methylation sites of a plant ribosome. 60S ribosomal subunit.

SM: SPM SPM SPM

Structure of complex 7qiz

7qiz

Specific features and methylation sites of a plant 80S ribosome

SM: SPM SPM SPM

Structure of complex 7r81

7r81

Structure of the translating Neurospora crassa ribosome arrested by cycloheximide

SM: 3HE

Structure of complex 7rqa

7rqa

Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MTI-tripeptidyl-tRNA analog ACCA-ITM at 2.40A resolution

SM: ARG ARG

Structure of complex 7rqb

7rqb

Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MAI-tripeptidyl-tRNA analog ACCA-IAM at 2.45A resolution

SM: ARG ARG

Structure of complex 7rqc

7rqc

Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MFI-tripeptidyl-tRNA analog ACCA-IFM at 2.50A resolution

SM: ARG ARG

Structure of complex 7rqd

7rqd

Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site deacylated tRNA analog CACCA, P-site MTI-tripeptidyl-tRNA analog ACCA-ITM, and chloramphenicol at 2.50A resolution

SM: ARG ARG CLM CLM

Structure of complex 7rqe

7rqe

Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site deacylated tRNA analog CACCA, P-site MAI-tripeptidyl-tRNA analog ACCA-IAM, and chloramphenicol at 2.40A resolution

SM: ARG ARG CLM CLM

Structure of complex 7ryf

7ryf

A. baumannii Ribosome-TP-6076 complex: P-site tRNA 70S

SM: 80P 80P 80P

Structure of complex 7ryg

7ryg

A. baumannii Ribosome-TP-6076 complex: E-site tRNA 70S

SM: 80P 80P 80P

Structure of complex 7ryh

7ryh

A. baumannii Ribosome-TP-6076 complex: Empty 70S

SM: 80P 80P 80P

Structure of complex 7s1h

7s1h

Wild-type Escherichia coli ribosome with antibiotic linezolid

SM: ZLD

Structure of complex 7s1j

7s1j

Wild-type Escherichia coli ribosome with antibiotic radezolid

SM: RD8

Structure of complex 7ssl

7ssl

Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)

SM: GDP

Structure of complex 7st7

7st7

Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio)

SM: GDP

Structure of complex 7ucj

7ucj

Mammalian 80S translation initiation complex with mRNA and Harringtonine

SM: MQ6

Structure of complex 7uck

7uck

80S translation initiation complex with ac4c(-1) mRNA and Harringtonine

SM: MQ6

Structure of complex 7ug6

7ug6

Cryo-EM structure of pre-60S ribosomal subunit, unmethylated G2922

SM: GDP

Structure of complex 7uoo

7uoo

Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state

SM: B3P B3P B3P GTP

Structure of complex 7uqb

7uqb

Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1-D52A strain with AlF4

SM: B3P B3P B3P GDP

Structure of complex 7uqz

7uqz

Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1 D52A strain

SM: B3P B3P B3P GDP

Structure of complex 7uvv

7uvv

A. baumannii ribosome-Streptothricin-F complex: 70S with P-site tRNA

SM: OI9 OI9

Structure of complex 7uvx

7uvx

A. baumannii 70S ribosome-Streptothricin-F complex

SM: OI9

Structure of complex 7uvy

7uvy

A. baumannii ribosome-Streptothricin-D complex: 70S with P-site tRNA

SM: OIY OIY OIY OIY OIY OIY OIY OIY OIY OIY OIY OIY

Structure of complex 7uvz

7uvz

A. baumannii ribosome-Streptothricin-D complex: 70S with E-site tRNA

SM: OIY OIY OIY OIY OIY OIY OIY OIY OIY OIY OIY

Structure of complex 7uw1

7uw1

A. baumannii 70S ribosome-Streptothricin-D complex

SM: OIY OIY OIY OIY OIY OIY OIY OIY OIY OIY OIY OIY

Structure of complex 7v08

7v08

Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a Spb1 D52A suppressor 3 strain

SM: B3P B3P B3P GDP

Structure of complex 8a3d

8a3d

Human mature large subunit of the ribosome with eIF6 and homoharringtonine bound

SM: EPE HMT SPM

Structure of complex 8a5i

8a5i

Cryo-EM structure of Lincomycin bound to the Listeria monocytogenes 50S ribosomal subunit.

SM: 3QB

Structure of complex 8akn

8akn

Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the terminating ribosome

SM: SPM