HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 7pd3

System information

Experimental technique Electron Microscopy
Experimental resolution 3.40
System mass 2010.50 kDa
Deposition year 2021
Molecule type RNA/Protein
# RNA entities 1
Organism Homo
RCSB PDB Entry 7pd3
Reference Chandrasekaran Viswanathan, Desai Nirupa, Burton Nicholas O, Yang Hanting, Price Jon, Miska Eric A, Ramakrishnan V. . Visualizing formation of the active site in the mitochondrial ribosome eLife
Equivalence Class NR_all_12763.36
BGSU version: 4.49

Compound GCP
Residue . / 402
Chain AF / z
Non-redundant True
Interacting RNA chains K/A
RNA environment detailled protein, other
RNA environment global RNA/Other
RNA family chains K/A: rRNA
RNA family global rRNA
Volume 78.20 Å3
Hydrophobicity 0.041
Hydrophilicity 1.460
Buriedness 0.932
Don/acc character 0.734
SiteScore 0.855
D Score 0.571
Kd