HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 7pjw

System information

Experimental technique Electron Microscopy
Experimental resolution 4.00
System mass 2311.76 kDa
Deposition year 2021
Molecule type RNA/Protein
# RNA entities 1
Organism Escherichia
RCSB PDB Entry 7pjw
Reference Petrychenko Valentyn, Peng Bee-Zen, de A. P. Schwarzer Ana C., Peske Frank, Rodnina Marina V., Fischer Niels. . Structural mechanism of GTPase-powered ribosome-tRNA movement Nature Communications

Compound AM2
Residue . / 2001
Chain HB / a
Non-redundant True
Interacting RNA chains HA/a
Volume 252.11 Å3
Hydrophobicity 0.214
Hydrophilicity 0.872
Buriedness 0.583
Don/acc character 4.006
SiteScore 1.087
D Score 0.981

Compound GDP
Residue . / 801
Chain JB / x
Non-redundant True
Interacting RNA chains H/A
Volume 646.56 Å3
Hydrophobicity 0.118
Hydrophilicity 1.400
Buriedness 0.822
Don/acc character 1.511
SiteScore 1.083
D Score 0.977