HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 7rqc

System information

Experimental technique X-ray
Experimental resolution 2.50
System mass 4432.04 kDa
Deposition year 2021
Molecule type RNA/Protein
# RNA entities 1
Organism Thermus
RCSB PDB Entry 7rqc
Reference Syroegin Egor A., Flemmich Laurin, Klepacki Dorota, Vazquez-Laslop Nora, Micura Ronald, Polikanov Yury S.. . Structural basis for the context-specific action of the classic peptidyl transferase inhibitor chloramphenicol Nature Structural & Molecular Biology
Equivalence Class NR_all_42622.80, NR_all_97519.80
BGSU version: 4.49

Compound ARG
Residue . / 231
Chain VRA / 1B
Non-redundant True
Interacting RNA chains B/1B
RNA environment detailled ion
RNA environment global RNA
RNA family chains B/1B: rRNA
RNA family global rRNA
Volume 285.72 Å3
Hydrophobicity 0.055
Hydrophilicity 1.221
Buriedness 0.657
Don/acc character 2.174
SiteScore 0.897
D Score 0.647
Kd

Compound ARG
Residue . / 317
Chain NTA / 1F
Non-redundant True
Interacting RNA chains A/1A
RNA environment detailled protein, ion
RNA environment global RNA/Protein
RNA family chains A/1A: rRNA
RNA family global rRNA
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -
Kd