HARIBOSS - RNA-SM complexes list

7fhi

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Interaction between a fluoroquinolone derivative and RNAs with a single bulge

SM: 53D

7fj0

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Interaction between a fluoroquinolone derivative and RNAs with a single bulge

SM: 53D

7jyy

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Crystal Structure of SARS-CoV-2 Nsp16/10 Heterodimer in Complex with (m7GpppA)pUpUpApApA (Cap-0) and S-Adenosylmethionine (SAM).

SM: SAM SAM

7jz0

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Crystal Structure of SARS-CoV-2 Nsp16/10 Heterodimer in Complex with (m7GpppA2m)pUpUpApApA (Cap-1) and S-Adenosyl-L-homocysteine (SAH).

SM: SAH SAH

7k9d

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Crystal structure of Bacillus halodurans OapB in complex with its OLE RNA target (crystal form I)

SM: EPE

7kkv

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Crystal structure of Bacillus halodurans OapB in complex with its OLE RNA target (native, crystal form I)

SM: EPE

7mjv

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MiaB in the complex with s-adenosylmethionine and RNA

SM: SAM

7mjw

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Methylated MiaB in the complex with 5'-deoxyadenosine, methionine and RNA

SM: 5AD 5AD ZKP ZKP

7mjx

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MiaB in the complex with 5'-deoxyadenosine, methionine and RNA

SM: 5AD 5AD

7mkn

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Escherichia coli RNA polymerase and RapA elongation complex

SM: 2TM

7mko

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Escherichia coli RNA polymerase elongation complex

SM: 2TM

7n2m

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Crystal structure of DNA polymerase alpha catalytic core in complex with dCTP and template/primer having T-C mismatch at the post-insertion site

SM: DCP

7ojn

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Lassa virus L protein in an elongation conformation [ELONGATION]

SM: 2KH

7orj

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La Crosse virus polymerase at transcription capped RNA cleavage stage

SM: ATP

7ork

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La Crosse virus polymerase in transcription mode with cleaved capped RNA entering the polymerase active site

SM: ATP

7orn

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La Crosse virus polymerase at replication initiation stage

SM: ATP

7po6

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Xist (m6A)UCG tetraloop RNA bound to the YTH domain of YTHDC1

SM: GTP

7vba

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Structure of the pre state human RNA Polymerase I Elongation Complex

SM: 2TM

7xpl

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Crystal structure of a C/D-free RNA-guided RNA 2'-O-methyltransferase

SM: SAH SAH

7yed

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In situ structure of polymerase complex of mammalian reovirus in the elongation state

SM: UTP

8as7

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Structure of the SFTSV L protein stalled at early elongation [EARLY-ELONGATION]

SM: 2KH EPE

8asb

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Structure of the SFTSV L protein stalled at early elongation with the endonuclease domain in a raised conformation [EARLY-ELONGATION-ENDO]

SM: 2KH

8asd

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Structure of the SFTSV L protein stalled at late elongation [LATE-ELONGATION]

SM: 2KH

8ej3

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M. tuberculosis RNAP pause escaped complex with Bacillus subtilis NusG and GMPCPP

SM: G2P

8g4w

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Cryo-EM consensus structure of Escherichia coli que-PEC (paused elongation complex) RNA Polymerase plus preQ1 ligand

SM: PRF

8g7e

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Cryo-EM structure of 3DVA component 0 of Escherichia coli que-PEC (paused elongation complex) RNA Polymerase plus preQ1 ligand

SM: PRF

8g8z

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Cryo-EM structure of 3DVA component 1 of Escherichia coli que-PEC (paused elongation complex) RNA Polymerase plus preQ1 ligand

SM: PRF

8gh6

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Bombyx mori R2 retrotransposon initiating target-primed reverse transcription

SM: TTP

8gs2

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Structure of the Cas7-11-Csx29-guide RNA-target RNA (non-matching PFS) complex

SM: C5P

8gwe

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SARS-CoV-2 E-RTC complex with RNA-nsp9 and GMPPNP

SM: GNP

8h0s

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Crystal structure of MnmM from B. subtilis complexed with Gln-TTG anti-codon stem loop and SAM (2.90 A)

SM: SAM SAM

8i43

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Interaction between a fluoroquinolone derivative KG022 and RNAs: effect of base pairs 3' adjacent to the bulge out residues

SM: 53D

8i44

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Interaction between a fluoroquinolone derivative KG022 and RNAs: effect of base pairs 3' adjacent to the bulge out residues

SM: 53D

8i45

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Interaction between a fluoroquinolone derivative KG022 and RNAs: effect of base pairs 3' adjacent to the bulge out residues

SM: 53D

8i46

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Interaction between a fluoroquinolone derivative KG022 and RNAs: effect of base pairs 3' adjacent to the bulge out residues

SM: 53D

8jy0

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Crystal structure of RhoBAST complexed with TMR-DN

SM: V8C V8C V8C

8opp

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Structure of human terminal uridylyltransferase 7 (hTUT7/ZCCHC6) bound with pre-let7g miRNA and UTPalphaS

SM: P5E

8pnq

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Influenza A/H7N9 polymerase in elongation state with continuous Pol II pS5 CTD peptide mimic bound in site 1A/2A

SM: 2KH

8psx

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Tilapia Lake Virus polymerase in vRNA elongation state (transcriptase conformation)

SM: A0I

8psz

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Tilapia Lake Virus polymerase in vRNA elongation state with additional mode B promoter (transcriptase conformation)

SM: A0I

8qmh

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Crystal structure of RNA G2C4 repeats in complex with small synthetic molecule ANP77

SM: W53

8qz8

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Tilapia Lake Virus polymerase in vRNA pre-termination state (transcriptase conformation)

SM: G2P

8r62

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Solution structure of Risdiplam bound to the RNA duplex formed upon 5'-splice site recognition

SM: Y59

8r63

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Solution structure of branaplam bound to the RNA duplex formed upon 5'-splice site recognition

SM: Y53

8r6y

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Structure of the SFTSV L protein stalled in a transcription-specific early elongation state with bound capped RNA [TRANSCRIPTION-EARLY-ELONGATION]

SM: 2KH

8r8p

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Solution structure of SMN-CX bound to the RNA helix formed upon SMN2 exon7 5'-splice site recognition

SM: YB3

8sq9

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SARS-CoV-2 replication-transcription complex bound to nsp9 and UMPCPP, as a pre-catalytic NMPylation intermediate

SM: WSB

8sqj

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SARS-CoV-2 replication-transcription complex bound to RNA-nsp9, as a noncatalytic RNA-nsp9 binding mode

SM: VSN

8ub7

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Diversity-generating retroelement (DGR) ribonucleoprotein reverse transcriptase - Active state (N-occupied)

SM: DCP

8vuo

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Crystal structure of SARS-CoV-2 nsp16/nsp10 in complex with Cap-1 RNA

SM: SAH SAH

8z8x

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Cryo-EM structure of Thogoto virus polymerase in a transcription initiation conformation

SM: G2P

8z90

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Cryo-EM structure of Thogoto virus polymerase in transcription initiation conformation 2

SM: G2P

8znq

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Solution structure of the complex of naphthyridine-azaquinolone and an RNA with ACG/AUA motif

SM: NAZ

9avr

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Human eIF4A-1 in complex with AMP-PNP, RNA, and the inhibitor silvestrol

SM: A1AG8

9c0j

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Structure of the elongating DRT2 reverse transcriptase in complex with its non-coding RNA and dNTPs

SM: TTP

9cpd

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Structures of small molecules bound to RNA repeat expansions that cause Huntington's disease-like 2 and myotonic dystrophy type 1

SM: MQC

9cpg

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Structures of small molecules bound to RNA repeat expansions that cause Huntington's disease-like 2 and myotonic dystrophy type 1

SM: A1AZM

9cpi

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Structures of small molecules bound to RNA repeat expansions that cause Huntington's disease-like 2 and myotonic dystrophy type 1

SM: A1AZL

9did

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Rous sarcoma virus frameshifting pseudoknot RNA

SM: TAM

9dll

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NMR structures of small molecules bound to a model of an RNA CAG repeat expansion.

SM: A1AZM