HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 8h0s

System information

Experimental technique X-ray
Experimental resolution 2.90
System mass 101.37 kDa
Deposition year 2022
Molecule type RNA/Protein
# RNA entities 1
Organism Bacillus
RCSB PDB Entry 8h0s
Reference Cho Gyuhyeok, Lee Jangmin, Kim Jungwook. . Identification of a novel 5-aminomethyl-2-thiouridine methyltransferase in tRNA modification Nucleic Acids Research

Compound SAM
Residue . / 301
Chain G / A
Non-redundant True
Interacting RNA chains E/X
RNA environment detailled protein
RNA environment global RNA/Protein
RNA family chains E/X: unknown
RNA family global unknown
Volume 191.39 Å3
Hydrophobicity 1.113
Hydrophilicity 1.308
Buriedness 0.868
Don/acc character 0.500
SiteScore 1.114
D Score 1.035
Kd

Compound SAM
Residue . / 301
Chain I / C
Non-redundant True
Interacting RNA chains F/Y
RNA environment detailled protein
RNA environment global RNA/Protein
RNA family chains F/Y: unknown
RNA family global unknown
Volume 191.74 Å3
Hydrophobicity 1.018
Hydrophilicity 1.142
Buriedness 0.816
Don/acc character 0.702
SiteScore 1.079
D Score 1.057
Kd